PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023892201.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | FAR1 | ||||||||
Protein Properties | Length: 256aa MW: 29783.6 Da PI: 6.2504 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.5 | 8.4e-27 | 79 | 169 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +Y++++GF+vr++++++s++n++++ ++fvCskeg+r+++ ++++ + ++tr gC+a++++ +++ kw+vtk+++eHnH+l+ XP_023892201.1 79 EFYVTYGRRTGFTVRIHHNRRSRMNNQVIGQDFVCSKEGFRAKKYVYRKDR-VlpPPPVTREGCQAMIRLALRDGVKWVVTKFVKEHNHKLM 169 6******************************************99883333.234899********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MMDNEPHQGF DLDDSDLDLQ AETYEKHIRI EDGLPNNLNM CVGEDDRVSD QSVGDLPMNA 60 EALEPYIGME FNSRDEAREF YVTYGRRTGF TVRIHHNRRS RMNNQVIGQD FVCSKEGFRA 120 KKYVYRKDRV LPPPPVTREG CQAMIRLALR DGVKWVVTKF VKEHNHKLMS PSKVPWRGSG 180 KHLVSEDEKD KRIRELSLEL YNEKQKCKRR CAAYEDQLNM ILKDLEQHTE HISKKVADIV 240 QSIKDIEEEQ SEADSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 4e-43 | FAR1 family protein |