PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892091.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YA
Protein Properties Length: 323aa    MW: 35454.8 Da    PI: 9.6056
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.13.8e-30157213158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++I++RRq+Rak   e+kl +++rk y+heSRh hA+rRpRg+gGrF
  XP_023892091.1 157 DGPIYVNAKQYHGIIRRRQSRAKGVMENKL-TRARKSYMHESRHLHAMRRPRGCGGRF 213
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MATQAVYFKE HEGIVHNSMG QVPSSWWGSF ASKSGYGESC GQLKSFSTDL PIGGDQLIAT  60
KQAGRGTEHG EERGNTTQFT IFSDNCKSSG DGQKPQATIS LQSSLSEYRG RFELGFSQPM  120
IYAKYPYVDQ RYGVFPNCGP QISGRVMLLP MNMATNDGPI YVNAKQYHGI IRRRQSRAKG  180
VMENKLTRAR KSYMHESRHL HAMRRPRGCG GRFLNTKNTN KEKSGTEVIK TGDGQLSQGT  240
GSQSSEAFQS DSGTFNSSKD AKGSGSNISE ITSMFSRGDL DRFQINHLIP PAHPLADLIE  300
GGRGLVMPKW VTAPDNCCNL SLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.23e-55NF-YA family protein