PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891834.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 248aa    MW: 26610.8 Da    PI: 5.2248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891834.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.62e-1586133355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r ++ +g+Wv+eIr+p++   ++r++lg+f  +e+Aa+a++ a+++l+g
  XP_023891834.1  86 YRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPMPEMAAAAYDVAALALKG 133
                     9***9.55.6*********843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MADHPNIPTN IHQLDQPHQP APPLDPSSLP PQLVQVQHSF PFHTCDSPSP TCDAPSSNLQ  60
PLKSPKPTAT TMASSSSSTT GKHPMYRGIR CRSGKWVSEI REPRKTTRIW LGTFPMPEMA  120
AAAYDVAALA LKGSDAVLNF PGSVATYPVP ASTSSLDIRN AATAAAALKK AELSQSQLQL  180
RQFQNDSDTM NAGWTSSGTE FLDEEAIFDM PSLLVDMAEG MLVSPPRINS SDDSPGNSDG  240
GQSLWGYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-43ERF family protein