PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891772.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 512aa    MW: 57859.3 Da    PI: 9.3345
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891772.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.63.9e-124603898
                    EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    l+ ++g +W+vkl  +k++g++ +++GW eF++ + ++ g  +vF+++g+s f  +v +f+
  XP_023891772.1  4 LTVPNGTKWKVKL--TKRDGEVCFQNGWCEFASCHAVNPGHLLVFRYEGNSHF--YVLIFD 60
                    67799********..**********************************9999..999998 PP
2B364.71.4e-20204301199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+ v+ ps+v  ++ l ++ +fae++++k  ++  ++l++ +  +W+vk++  k + + v+++GWkeF+++n Lk+gD+++F+l++  e  ++v 
  XP_023891772.1 204 FKVVMQPSYVYPRNSLNISSSFAEKYMSK-MSGEFVILRSFDRGTWSVKFSNYKAQTKSVFRQGWKEFARDNSLKVGDVCIFELINGIEVAFKVA 297
                     6667899*******************766.56679***************887777789*************************98844448999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr+
  XP_023891772.1 298 IFRA 301
                     9885 PP
3B341.91.8e-13409509498
                     E-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     v +++++ ++g + lp   + ++    g ++++++ ++  +   r W vkl y      +s+++ l++GW+ F+ +n L++gD++vF+l+ r++ 
  XP_023891772.1 409 VIMQPSYISNGHMNLPHGII-NYllrkGFITKGGVLIVKLQVVDRLWPVKL-YayegMYQSSSCKLSAGWSAFATENTLQVGDVCVFELIMRDNV 501
                     45677777788899999988.66688866666777777777888*******.4368766777799*************************99899 PP

                     ..EEEEE- CS
              B3  91 elvvkvfr 98 
                      l+v++fr
  XP_023891772.1 502 VLKVHIFR 509
                     89999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MAFLTVPNGT KWKVKLTKRD GEVCFQNGWC EFASCHAVNP GHLLVFRYEG NSHFYVLIFD  60
DTATEIDYPL DDQQQVDMME DIESDDNSLE IMDGFMPSRK TREKSPLPCP LPHKRSKTNP  120
RSSDLQAGGD THFRPELTKS KGSMLEKSKM NAGVSFTRRE SKEECSGATK RCPKSEVIER  180
TLSASEKDRA FQRVSAFESK NPFFKVVMQP SYVYPRNSLN ISSSFAEKYM SKMSGEFVIL  240
RSFDRGTWSV KFSNYKAQTK SVFRQGWKEF ARDNSLKVGD VCIFELINGI EVAFKVAIFR  300
AANDIDCPLS NGSAHGVGGN RVGHKSSPLV KPKSDYYLDD ESFSHDQCPL KDGGVGMSTN  360
RRRLKAKALV KNHEYKALEK KQELMTTNGK AENLVRANAF KSKNPLFMVI MQPSYISNGH  420
MNLPHGIINY LLRKGFITKG GVLIVKLQVV DRLWPVKLYA YEGMYQSSSC KLSAGWSAFA  480
TENTLQVGDV CVFELIMRDN VVLKVHIFRC LD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-44B3 family protein