PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891771.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 513aa    MW: 57930.4 Da    PI: 9.3345
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.63.9e-124603898
                    EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    l+ ++g +W+vkl  +k++g++ +++GW eF++ + ++ g  +vF+++g+s f  +v +f+
  XP_023891771.1  4 LTVPNGTKWKVKL--TKRDGEVCFQNGWCEFASCHAVNPGHLLVFRYEGNSHF--YVLIFD 60
                    67799********..**********************************9999..999998 PP
2B364.71.4e-20205302199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+ v+ ps+v  ++ l ++ +fae++++k  ++  ++l++ +  +W+vk++  k + + v+++GWkeF+++n Lk+gD+++F+l++  e  ++v 
  XP_023891771.1 205 FKVVMQPSYVYPRNSLNISSSFAEKYMSK-MSGEFVILRSFDRGTWSVKFSNYKAQTKSVFRQGWKEFARDNSLKVGDVCIFELINGIEVAFKVA 298
                     6667899*******************766.56679***************887777789*************************98844448999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr+
  XP_023891771.1 299 IFRA 302
                     9885 PP
3B341.91.8e-13410510498
                     E-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     v +++++ ++g + lp   + ++    g ++++++ ++  +   r W vkl y      +s+++ l++GW+ F+ +n L++gD++vF+l+ r++ 
  XP_023891771.1 410 VIMQPSYISNGHMNLPHGII-NYllrkGFITKGGVLIVKLQVVDRLWPVKL-YayegMYQSSSCKLSAGWSAFATENTLQVGDVCVFELIMRDNV 502
                     45677777788899999988.66688866666777777777888*******.4368766777799*************************99899 PP

                     ..EEEEE- CS
              B3  91 elvvkvfr 98 
                      l+v++fr
  XP_023891771.1 503 VLKVHIFR 510
                     89999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MAFLTVPNGT KWKVKLTKRD GEVCFQNGWC EFASCHAVNP GHLLVFRYEG NSHFYVLIFD  60
DTATEIDYPL DDQQQVDMME DIESDDNSLE IMDGFMPSRK TREKSPLPCP LPHKRSKTNP  120
RSSDLQAGGD THFRPELTKS KGSMLEKSKM NAGVSFTRRE SKAEECSGAT KRCPKSEVIE  180
RTLSASEKDR AFQRVSAFES KNPFFKVVMQ PSYVYPRNSL NISSSFAEKY MSKMSGEFVI  240
LRSFDRGTWS VKFSNYKAQT KSVFRQGWKE FARDNSLKVG DVCIFELING IEVAFKVAIF  300
RAANDIDCPL SNGSAHGVGG NRVGHKSSPL VKPKSDYYLD DESFSHDQCP LKDGGVGMST  360
NRRRLKAKAL VKNHEYKALE KKQELMTTNG KAENLVRANA FKSKNPLFMV IMQPSYISNG  420
HMNLPHGIIN YLLRKGFITK GGVLIVKLQV VDRLWPVKLY AYEGMYQSSS CKLSAGWSAF  480
ATENTLQVGD VCVFELIMRD NVVLKVHIFR CLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-45B3 family protein