PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023891575.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 300aa MW: 34025.2 Da PI: 6.9779 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT Ed++l ++vk++G g W+ +++ g++R++k+c++rw++yl XP_023891575.1 14 RGAWTVMEDKILTEYVKLHGEGKWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_023891575.1 67 RGNITRDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 7899******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MGRSPCCSKE GLNRGAWTVM EDKILTEYVK LHGEGKWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI TRDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NIGKKVQDHL 120 SHTSKRSNQV HTQEKQNHSV ERLARGPAEA KIGSSCVVRT KATKCTKAVN IITSEQPIQL 180 DQHNQISETK PEVEVEVQSS MVHHHDPVDF SQFMLGENNP SNFMMDFEME ENFISDLLNL 240 DFSQLPCFED GGDSSSNTCD KGHSSPISDH TQLVSGDTLH GSNFQSVGSL IESELDWLCD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 3e-63 | MYB family protein |