PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023891483.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 1014aa MW: 112764 Da PI: 9.5372

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023891483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.6	6.4e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g+t +qV+ +F +R++ +k XP_023891483.1 69 KRPRDLLNPKAVKYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFASQRTRVRK 125 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1014 aa Download sequence
MEVSRDDFSE LEIGTSVDSF TRFVDSQREL FHNQIDDLQR IVVTQCKLTG VNPLSQEMAA 60 GALSIKIGKR PRDLLNPKAV KYMQSVFSIK DAISKKESRE ISALFGVTVT QVRDFFASQR 120 TRVRKLVRLS REKAMRSSAC KELHDGALIS SDPMMPIDPV PLNSVGPASV EEAPSCSTQD 180 EALPGLDDED KHFVENIFNF MRKEETFSGQ VKLMEWILQI QNSSVLCWFL TKGGVMILAT 240 WLSQAAIEEQ TSVLLVILKV LCHLPLHKAL PVHMSAILQS VNRLRFYRTS DISNRARVLL 300 SRWSKLLARS QAMKKPNGMK SPSDIQNDMM LKQSIGDIME EESWQSNMKI PEDILAPLYG 360 NSENLRKLDP PQALKLLTAS SDDSNRKQIL GVSSQTRERR KVQLVEQPGQ KMAGRSTQAT 420 RSAPVNQGRP MSADDIQKAK MRAQFMQTKY GKNGSSNESK ESKTEGLNKP STTQASTLNP 480 VYKVPVRPNI EEQKKPVILP SKISNKVEAP LDPKSRMDSK EPLWEKCRRV QIQWQTPPEI 540 RLNDHWSVGG GENSKEVEVQ KNRNRREKET IYQTFQEIPS NPKEPWDIEM DYDDTLTPQV 600 PIEQPPDADS LETQVATNQV VNSAVSLATP SSQASSTAEP DLELLAVLLK NPELVFALTS 660 GQAGNLSSEE TVKLLDMIKA GGAGLVGSFN SGRVEEKVEV SLPSPTPSSN SGTSGWRPEV 720 AKNPFMQPSS VANRVAYTSP GVATTSLMLP QATEANLIPP QQSSSMAQQF AAAMHTYSLP 780 QTTANIPGRQ LPSLHPARPT PASEMVLTSR NSSSMGAPLH NFSTTAAPSA LQIESTSNIK 840 PAPVSVTLNT PGRAHASFPP QPTRSKTHSQ SLHRSTILSE PQPPAPLYPS RPPIGKMDPV 900 SDSWRASQAL PPNYHSQANQ NNYNSLVGGS RQPVLQPGPF LDRNEYVAQE QYESWSPDNS 960 PTRTTDYMMG RNFPEPRMNP GWNNRPDRSR QRGNFSGYRD HNRYGDRKWR DRRH

Sequence ? help Back to Top

Protein Sequence Length: 1014 aa Download sequence

MEVSRDDFSE LEIGTSVDSF TRFVDSQREL FHNQIDDLQR IVVTQCKLTG VNPLSQEMAA  60
GALSIKIGKR PRDLLNPKAV KYMQSVFSIK DAISKKESRE ISALFGVTVT QVRDFFASQR  120
TRVRKLVRLS REKAMRSSAC KELHDGALIS SDPMMPIDPV PLNSVGPASV EEAPSCSTQD  180
EALPGLDDED KHFVENIFNF MRKEETFSGQ VKLMEWILQI QNSSVLCWFL TKGGVMILAT  240
WLSQAAIEEQ TSVLLVILKV LCHLPLHKAL PVHMSAILQS VNRLRFYRTS DISNRARVLL  300
SRWSKLLARS QAMKKPNGMK SPSDIQNDMM LKQSIGDIME EESWQSNMKI PEDILAPLYG  360
NSENLRKLDP PQALKLLTAS SDDSNRKQIL GVSSQTRERR KVQLVEQPGQ KMAGRSTQAT  420
RSAPVNQGRP MSADDIQKAK MRAQFMQTKY GKNGSSNESK ESKTEGLNKP STTQASTLNP  480
VYKVPVRPNI EEQKKPVILP SKISNKVEAP LDPKSRMDSK EPLWEKCRRV QIQWQTPPEI  540
RLNDHWSVGG GENSKEVEVQ KNRNRREKET IYQTFQEIPS NPKEPWDIEM DYDDTLTPQV  600
PIEQPPDADS LETQVATNQV VNSAVSLATP SSQASSTAEP DLELLAVLLK NPELVFALTS  660
GQAGNLSSEE TVKLLDMIKA GGAGLVGSFN SGRVEEKVEV SLPSPTPSSN SGTSGWRPEV  720
AKNPFMQPSS VANRVAYTSP GVATTSLMLP QATEANLIPP QQSSSMAQQF AAAMHTYSLP  780
QTTANIPGRQ LPSLHPARPT PASEMVLTSR NSSSMGAPLH NFSTTAAPSA LQIESTSNIK  840
PAPVSVTLNT PGRAHASFPP QPTRSKTHSQ SLHRSTILSE PQPPAPLYPS RPPIGKMDPV  900
SDSWRASQAL PPNYHSQANQ NNYNSLVGGS RQPVLQPGPF LDRNEYVAQE QYESWSPDNS  960
PTRTTDYMMG RNFPEPRMNP GWNNRPDRSR QRGNFSGYRD HNRYGDRKWR DRRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein