PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023891477.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 1022aa MW: 113773 Da PI: 9.5884

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023891477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.6	6.5e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g+t +qV+ +F +R++ +k XP_023891477.1 69 KRPRDLLNPKAVKYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFASQRTRVRK 125 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1022 aa Download sequence
MEVSRDDFSE LEIGTSVDSF TRFVDSQREL FHNQIDDLQR IVVTQCKLTG VNPLSQEMAA 60 GALSIKIGKR PRDLLNPKAV KYMQSVFSIK DAISKKESRE ISALFGVTVT QVRDFFASQR 120 TRVRKLVRLS REKAMRSSAC KELHDGALIS SDPMMPIDPV PLNSVGPASV EEAPSCSTQD 180 EALPGLDDED KHFVENIFNF MRKEETFSGQ VKLMEWILQI QNSSVLCWYL SNNFLRFLTK 240 GGVMILATWL SQAAIEEQTS VLLVILKVLC HLPLHKALPV HMSAILQSVN RLRFYRTSDI 300 SNRARVLLSR WSKLLARSQA MKKPNGMKSP SDIQNDMMLK QSIGDIMEEE SWQSNMKIPE 360 DILAPLYGNS ENLRKLDPPQ ALKLLTASSD DSNRKQILGV SSQTRERRKV QLVEQPGQKM 420 AGRSTQATRS APVNQGRPMS ADDIQKAKMR AQFMQTKYGK NGSSNESKES KTEGLNKPST 480 TQASTLNPVY KVPVRPNIEE QKKPVILPSK ISNKVEAPLD PKSRMDSKEP LWEKCRRVQI 540 QWQTPPEIRL NDHWSVGGGE NSKEVEVQKN RNRREKETIY QTFQEIPSNP KEPWDIEMDY 600 DDTLTPQVPI EQPPDADSLE TQVATNQVVN SAVSLATPSS QASSTAEPDL ELLAVLLKNP 660 ELVFALTSGQ AGNLSSEETV KLLDMIKAGG AGLVGSFNSG RVEEKVEVSL PSPTPSSNSG 720 TSGWRPEVAK NPFMQPSSVA NRVAYTSPGV ATTSLMLPQA TEANLIPPQQ SSSMAQQFAA 780 AMHTYSLPQT TANIPGRQLP SLHPARPTPA SEMVLTSRNS SSMGAPLHNF STTAAPSALQ 840 IESTSNIKPA PVSVTLNTPG RAHASFPPQP TRSKTHSQSL HRSTILSEPQ PPAPLYPSRP 900 PIGKMDPVSD SWRASQALPP NYHSQANQNN YNSLVGGSRQ PVLQPGPFLD RNEYVAQEQY 960 ESWSPDNSPT RTTDYMMGRN FPEPRMNPGW NNRPDRSRQR GNFSGYRDHN RYGDRKWRDR 1020 RH

Sequence ? help Back to Top

Protein Sequence Length: 1022 aa Download sequence

MEVSRDDFSE LEIGTSVDSF TRFVDSQREL FHNQIDDLQR IVVTQCKLTG VNPLSQEMAA  60
GALSIKIGKR PRDLLNPKAV KYMQSVFSIK DAISKKESRE ISALFGVTVT QVRDFFASQR  120
TRVRKLVRLS REKAMRSSAC KELHDGALIS SDPMMPIDPV PLNSVGPASV EEAPSCSTQD  180
EALPGLDDED KHFVENIFNF MRKEETFSGQ VKLMEWILQI QNSSVLCWYL SNNFLRFLTK  240
GGVMILATWL SQAAIEEQTS VLLVILKVLC HLPLHKALPV HMSAILQSVN RLRFYRTSDI  300
SNRARVLLSR WSKLLARSQA MKKPNGMKSP SDIQNDMMLK QSIGDIMEEE SWQSNMKIPE  360
DILAPLYGNS ENLRKLDPPQ ALKLLTASSD DSNRKQILGV SSQTRERRKV QLVEQPGQKM  420
AGRSTQATRS APVNQGRPMS ADDIQKAKMR AQFMQTKYGK NGSSNESKES KTEGLNKPST  480
TQASTLNPVY KVPVRPNIEE QKKPVILPSK ISNKVEAPLD PKSRMDSKEP LWEKCRRVQI  540
QWQTPPEIRL NDHWSVGGGE NSKEVEVQKN RNRREKETIY QTFQEIPSNP KEPWDIEMDY  600
DDTLTPQVPI EQPPDADSLE TQVATNQVVN SAVSLATPSS QASSTAEPDL ELLAVLLKNP  660
ELVFALTSGQ AGNLSSEETV KLLDMIKAGG AGLVGSFNSG RVEEKVEVSL PSPTPSSNSG  720
TSGWRPEVAK NPFMQPSSVA NRVAYTSPGV ATTSLMLPQA TEANLIPPQQ SSSMAQQFAA  780
AMHTYSLPQT TANIPGRQLP SLHPARPTPA SEMVLTSRNS SSMGAPLHNF STTAAPSALQ  840
IESTSNIKPA PVSVTLNTPG RAHASFPPQP TRSKTHSQSL HRSTILSEPQ PPAPLYPSRP  900
PIGKMDPVSD SWRASQALPP NYHSQANQNN YNSLVGGSRQ PVLQPGPFLD RNEYVAQEQY  960
ESWSPDNSPT RTTDYMMGRN FPEPRMNPGW NNRPDRSRQR GNFSGYRDHN RYGDRKWRDR  1020
RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-179	HB-other family protein