PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023891366.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 344aa    MW: 39213.9 Da    PI: 6.4474
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023891366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.8e-05267289123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C +Cgk F  + + ++H +++
  XP_023891366.1 267 FMCRKCGKAFAVRGDWRTHEKNC 289
                     89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MADPYSNFFS GLFKFNPLIH QYYPPSNPPQ HPSYAHNFFI NQNLNSFPYQ TPPPSPPLRE  60
ALPLLSLSPT RQEQEQQDQQ QKEEEEEELL VDKEQYCTAM DVDKITKHTD EEEEDEAVTV  120
ALHIGLPSPS AAEMASMLSA SSSEINDKDH GDGDDSGYSI NRLNKGQYWI PTPSQILIGP  180
TQFSCPVCCK TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTGMLRLPCY CCAPGCRNNI  240
DHPRAKPLKD FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG KLWYCICGSD  300
FKHKRSLKDH IKAFGSGHAA YGINGFEEED EPASEVEQDN ESMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-135C2H2 family protein