PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023891299.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 311aa MW: 35235.4 Da PI: 6.7397 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.7e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l +++++G +W + +r g+ R++k+c++rw +yl XP_023891299.1 14 KGAWTPEEDGKLRSYIHRYGHSNWCKLPRLAGLSRCGKSCRLRWVNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l+ +++++ G++ W+ Ia+ + gRt++++k++w+++l XP_023891299.1 67 RGNFTKEEEDLIFKLHEEAGNK-WSMIAKNLS-GRTDNEIKNHWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MVRGPFYDKN GLKKGAWTPE EDGKLRSYIH RYGHSNWCKL PRLAGLSRCG KSCRLRWVNY 60 LQPGVKRGNF TKEEEDLIFK LHEEAGNKWS MIAKNLSGRT DNEIKNHWHT HLKKHVKKIA 120 KTSQRKAKKI KESESESLRA SCSPNQSLES SPLTTELSSS KLSSLSCDNS TVIGTNWTEE 180 DSLSSLETSQ NSLENMDLKK YSKKTLKTES LHANDPFHHI LESSPLSPEV SSAKFSSLGS 240 DHSSIPGINW IEEDVLASFE TLDAAFGDFW TEPFIADNIY IPDELPISPY VSYYDDGTDL 300 FDQVMQELPK N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65230.1 | 8e-53 | MYB family protein |