PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023891221.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 410aa MW: 45883.2 Da PI: 7.5677

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023891221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.5	1.6e-15	20	92	15	91
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 ++++p+kf++++g + s tl +sgr W v+l rk ++r ++ +GW eFvk + + +g ++F+++g+s+f XP_023891221.1 20 NMRIPNKFVRKFGDE--LSSVATLSVPSGRYWLVEL--RKAGQRLWFHDGWHEFVKHHCIHAGNLLIFRYEGNSNFD 92 489*******865..7779999********..*******************************999883 PP
2	B3	60.4	3e-19	308	396	4	95
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE..E..EEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse..felvvk 95 v++ps+ +k +l +p +fa+++ ++ s ++l+ ++g sW v++ + +++ l++GW+eFv +n L+egD++vF+l+++++ +l+v+ XP_023891221.1 308 VMKPSYIHKGYLLHIPSSFAQKYLNS---SGSIVLQISDGPSWLVRC--INEGNGAKLSQGWREFVLDNCLEEGDVCVFELISKEDimLKLKVT 396 7899*****************433...336***********..88888899*********************99765511445555 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MFAKVAVFPC GHGEKIEMLN MRIPNKFVRK FGDELSSVAT LSVPSGRYWL VELRKAGQRL 60 WFHDGWHEFV KHHCIHAGNL LIFRYEGNSN FDIYMFNLTA CESCNIPSCS EEPNHVKQCP 120 ASLGKVADNA SIEILGAEEP SHGKHHPVLH GKEIEDDDSI EFLGSVPPRP TSMPWRNNVS 180 DEHVDQQKPY KTCIRTALKN LMHRPDGDNI HLAKDADTLK AKVRSTREIG IQFNETELTR 240 TAGEVGSGYS DEARQSAKRR KQSTEPTEFN VEVGIPGAKV STAVAEKRGR AIRASLRFTP 300 GNPFCRVVMK PSYIHKGYLL HIPSSFAQKY LNSSGSIVLQ ISDGPSWLVR CINEGNGAKL 360 SQGWREFVLD NCLEEGDVCV FELISKEDIM LKLKVTIFRV LEDAGPGNQP

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MFAKVAVFPC GHGEKIEMLN MRIPNKFVRK FGDELSSVAT LSVPSGRYWL VELRKAGQRL  60
WFHDGWHEFV KHHCIHAGNL LIFRYEGNSN FDIYMFNLTA CESCNIPSCS EEPNHVKQCP  120
ASLGKVADNA SIEILGAEEP SHGKHHPVLH GKEIEDDDSI EFLGSVPPRP TSMPWRNNVS  180
DEHVDQQKPY KTCIRTALKN LMHRPDGDNI HLAKDADTLK AKVRSTREIG IQFNETELTR  240
TAGEVGSGYS DEARQSAKRR KQSTEPTEFN VEVGIPGAKV STAVAEKRGR AIRASLRFTP  300
GNPFCRVVMK PSYIHKGYLL HIPSSFAQKY LNSSGSIVLQ ISDGPSWLVR CINEGNGAKL  360
SQGWREFVLD NCLEEGDVCV FELISKEDIM LKLKVTIFRV LEDAGPGNQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	6e-65	B3 family protein