PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023891209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 25676.5 Da PI: 4.6486 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.7e-19 | 94 | 143 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r+++g+f+tae Aa a+++a+ +++g XP_023891209.1 94 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWIGTFDTAEAAALAYDQAAFAMRG 143 9*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
MDSSFYQNPY PEFSSSSSFN SSESLSCNNY MPNFENQYLP FNENDTQEML LYGVLAEVTK 60 DSSETASSVH VKDHEEVNSR ANEGGEPMKE EISYRGVRRR PWGKYAAEIR DSTRNGVRVW 120 IGTFDTAEAA ALAYDQAAFA MRGSMAVLNF PEEMVKESLK KMNYGHEEGC SPVLELKKRH 180 SLKKKSKSKK KKEEEINSGL ENMVVFEDLG ADYLEELLNI SESASPE |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 177 | 192 | KKRHSLKKKSKSKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-48 | ERF family protein |