PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023890942.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 533aa MW: 58927.1 Da PI: 7.2386

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023890942.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.9	2.6e-09	164	212	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 r +W+ +E l+++v+q+G g+W++I + +Rt+ ++++r++ XP_023890942.1 164 RRAWSDDETVDLLKGVAQHGVGNWTKILESPEydfDRRTALDLRDRFRV 212 679********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MDRSATLPYS LDYINRPNPI EPQSDAHRHP LNRPSQLSNS SNEGLRRLLV PERQPSTNGG 60 LSKRRKPTAG RNDADDLSTG SLDLPGIPVR TGTKRMRIPP TLSGLHQPPP DARILPSISV 120 EQPADARAAG AAEPVVPTSS SEVATEDPQY LRQRITPRIP KTIRRAWSDD ETVDLLKGVA 180 QHGVGNWTKI LESPEYDFDR RTALDLRDRF RVCRPMDYKV NYKQAPLKRR GKVSARGSNS 240 EDAPKITKNA RKSVSELRAI GIEQPFVKVS RRTRTAYTPF EDRALLEGFA IYGSTWAAIL 300 EDAKDIFRPQ RTATDLRDRF RTRYPEEYAK IGLAPRPEVF PPPPQRKART RTPDLNTEMP 360 NQVSSVQATS TTAPAFDPFP LGDPYPPLAT RSQPNSNHPY NDVFFGAPLG SAFDDNEPVD 420 QSIVLDRGIL DWANEPLPTA LPADYSGRMD IDPQATMRPW NDTQTFPANT YPAGNGSGST 480 YMNGEILPSL AAITADGMDG LQSEHLELPS LMLEAGVDGR GAGHIMNIED MLG

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MDRSATLPYS LDYINRPNPI EPQSDAHRHP LNRPSQLSNS SNEGLRRLLV PERQPSTNGG  60
LSKRRKPTAG RNDADDLSTG SLDLPGIPVR TGTKRMRIPP TLSGLHQPPP DARILPSISV  120
EQPADARAAG AAEPVVPTSS SEVATEDPQY LRQRITPRIP KTIRRAWSDD ETVDLLKGVA  180
QHGVGNWTKI LESPEYDFDR RTALDLRDRF RVCRPMDYKV NYKQAPLKRR GKVSARGSNS  240
EDAPKITKNA RKSVSELRAI GIEQPFVKVS RRTRTAYTPF EDRALLEGFA IYGSTWAAIL  300
EDAKDIFRPQ RTATDLRDRF RTRYPEEYAK IGLAPRPEVF PPPPQRKART RTPDLNTEMP  360
NQVSSVQATS TTAPAFDPFP LGDPYPPLAT RSQPNSNHPY NDVFFGAPLG SAFDDNEPVD  420
QSIVLDRGIL DWANEPLPTA LPADYSGRMD IDPQATMRPW NDTQTFPANT YPAGNGSGST  480
YMNGEILPSL AAITADGMDG LQSEHLELPS LMLEAGVDGR GAGHIMNIED MLG