PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023890901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 297aa MW: 32202.9 Da PI: 4.3977 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00021 | 271 | 294 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+++F + L++H + H XP_023890901.1 271 FSCQTCSRTFGSEVGLQSHTKAkH 294 89*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MEFWGVEVKA GQPVKVSPGE EKLIHLSQAS LGESKNKGNE STPIFVKFGE QKLVLGTLSQ 60 EKFPQLSFDL VFEKEFELSH NWKNGSVYFA GYKAAAMYED ERATDSEMDS FDEEDEEELP 120 LNIAENGKAG PKVAPVKSIA APSEKQVKIS EPSKDDEDDD SSESSDEDDD DDDSGDEDED 180 MSFGSAEDDD ESDDEPEETP KKVESSKKRP SESATKTPVP SKKAKAATPQ KTDGKKVGGH 240 TATPHPSKKA AKTPATSEQS KQKSPKSGGA FSCQTCSRTF GSEVGLQSHT KAKHGEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 1e-40 | C2H2 family protein |