PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023890706.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 733aa MW: 79468.2 Da PI: 8.9053

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023890706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	4.8e-05	576	601	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C+ C+++F ++ nL++H r H XP_023890706.1 576 YTCTyhGCTQRFDSQVNLQKHKREvH 601 8999***************988 PP
2	zf-C2H2	13.5	0.00021	671	689	6	23
TTEEESSHHHHHHHHHH.T CS zf-C2H2 6 CgksFsrksnLkrHirt.H 23 C+++Fsr+++L+rH t H XP_023890706.1 671 CNTVFSRPYDLTRHEDTiH 689 **************99888 PP
3	zf-C2H2	21	8.7e-07	697	721	2	23
EETTTT..EEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCg..ksFsrksnLkrHirt.H 23 +Cp C k+Fsr++ L+rH+r+ H XP_023890706.1 697 RCPMCReeKTFSRNDALTRHMRVvH 721 7*********************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MYTASSLVVE SLPNSLGSTT TTISRPSPHT TSVLYTSTPP RPTFATDSDQ DRIRQYHHPI 60 AHATPLQRPP FCMNHAQRPS PHVAQHPLAH HSSTTSLLPP NLDASPYRQS SAATGGTTRS 120 DWQVQHTSMG GPAVTAQNGL KRTRPHQRTP SASTVNSTGP SSPYPQNLSY PAIVSSDYSP 180 AHFAEYSKLL TPSHTPVSSN FLAAGYVPTP STHAFSAHQA MKSFAIDHHL EDFTPDYSHS 240 ARRSMSSRGH DSPATPQSGI GDSADTNQYN LAGSNGESRL YQAMMGFDDC LLFGEAEHVR 300 PANPDVQLFR TESQAYQDEL FNPSLALSVA PVHTTKTTQN FLSPHSSVMS QRLQTANIAR 360 SQSPNPASTV SRERSPFRNG SPFAASSYPA SPHGVGTAAS MRQQQKEQAE QAEYARSRPQ 420 LNREPTKTIS PKDALLDYNE PDSTPLFQDN VPLGYKQHTG GSEQWPQGFS FGNLQMQTTP 480 KFRATSGDGL AGSDAYNYMS LPQSQTPQGQ IPNLSYPAAS YAPAKMTSYP NSDATPAFPA 540 SLASMESSTG SLDEEHNHAP SVARRPADTR ANTGTYTCTY HGCTQRFDSQ VNLQKHKREV 600 HRSQPAPPSH EAASTGSGTA ASSGSGSESP RSSASPDPST SGMTSAAIMA RNSQAGPHRC 660 TRINPSTNKP CNTVFSRPYD LTRHEDTIHN GRKQKVRCPM CREEKTFSRN DALTRHMRVV 720 HPEAEAFGKR GRS

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MYTASSLVVE SLPNSLGSTT TTISRPSPHT TSVLYTSTPP RPTFATDSDQ DRIRQYHHPI  60
AHATPLQRPP FCMNHAQRPS PHVAQHPLAH HSSTTSLLPP NLDASPYRQS SAATGGTTRS  120
DWQVQHTSMG GPAVTAQNGL KRTRPHQRTP SASTVNSTGP SSPYPQNLSY PAIVSSDYSP  180
AHFAEYSKLL TPSHTPVSSN FLAAGYVPTP STHAFSAHQA MKSFAIDHHL EDFTPDYSHS  240
ARRSMSSRGH DSPATPQSGI GDSADTNQYN LAGSNGESRL YQAMMGFDDC LLFGEAEHVR  300
PANPDVQLFR TESQAYQDEL FNPSLALSVA PVHTTKTTQN FLSPHSSVMS QRLQTANIAR  360
SQSPNPASTV SRERSPFRNG SPFAASSYPA SPHGVGTAAS MRQQQKEQAE QAEYARSRPQ  420
LNREPTKTIS PKDALLDYNE PDSTPLFQDN VPLGYKQHTG GSEQWPQGFS FGNLQMQTTP  480
KFRATSGDGL AGSDAYNYMS LPQSQTPQGQ IPNLSYPAAS YAPAKMTSYP NSDATPAFPA  540
SLASMESSTG SLDEEHNHAP SVARRPADTR ANTGTYTCTY HGCTQRFDSQ VNLQKHKREV  600
HRSQPAPPSH EAASTGSGTA ASSGSGSESP RSSASPDPST SGMTSAAIMA RNSQAGPHRC  660
TRINPSTNKP CNTVFSRPYD LTRHEDTIHN GRKQKVRCPM CREEKTFSRN DALTRHMRVV  720
HPEAEAFGKR GRS