PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023890604.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 608aa MW: 65756.1 Da PI: 5.9207

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023890604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.5	6.3e-07	456	479	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+++F+r+++LkrH r+ H XP_023890604.1 456 FVCTLCSRRFRRQEHLKRHYRSlH 479 89*******************988 PP
2	zf-C2H2	29.8	1.4e-09	485	507	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+dCgk Fsr++nL +H+rtH XP_023890604.1 485 FECTDCGKKFSRSDNLSQHQRTH 507 89********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MEYAMHPPMG PTPFFYYNPQ ASPDSEQQRQ QARFTPHPHP AGPLPMAVLP SSPEHLMACQ 60 QAMYQRPYST STPQLQLQPV PAYISQAMLT PVASPRQHDY KPTILVQQEQ RCLMPLDTSA 120 CHGYYPATPT LSASSSFSSL DSPLPPTDIL PTPITGQVLF GTPSMTAFVK EGCEEEVLSE 180 VLAGGDWTRP GSPPMTPVFL HPGNVKCADA PSGPLSPSPS PIHRMCATED EVCDPRKLSI 240 GSTALAELSA IPLPTLATSH EENKAILQGE LAAPQQLSQR PQDFTQVAIA TSHELAHYNG 300 LPTFEPIFEL DVEDDFSGLV TYAGPETIHF NGTKRQRLDI LPGIVEDDGF FSEESFSDED 360 DFATAGSFSP CSSEYSTPES SMPAIKSKRK HSKRVTDDAV LTTHAAGHHS SNESSSAAPS 420 TASEPSESAA ATPTQSGGVS RRGRKQSLTD DPSKTFVCTL CSRRFRRQEH LKRHYRSLHT 480 HDKPFECTDC GKKFSRSDNL SQHQRTHGAG TMIMGVLTQP MADGMQQPIE SVNGGDSGSM 540 IRPKSQDSFQ SHLSGPQRVS PDAGQLGAVL FDITAQAAGS SSSSAGYSDS DSSQGSDQKT 600 PKKRKREE

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MEYAMHPPMG PTPFFYYNPQ ASPDSEQQRQ QARFTPHPHP AGPLPMAVLP SSPEHLMACQ  60
QAMYQRPYST STPQLQLQPV PAYISQAMLT PVASPRQHDY KPTILVQQEQ RCLMPLDTSA  120
CHGYYPATPT LSASSSFSSL DSPLPPTDIL PTPITGQVLF GTPSMTAFVK EGCEEEVLSE  180
VLAGGDWTRP GSPPMTPVFL HPGNVKCADA PSGPLSPSPS PIHRMCATED EVCDPRKLSI  240
GSTALAELSA IPLPTLATSH EENKAILQGE LAAPQQLSQR PQDFTQVAIA TSHELAHYNG  300
LPTFEPIFEL DVEDDFSGLV TYAGPETIHF NGTKRQRLDI LPGIVEDDGF FSEESFSDED  360
DFATAGSFSP CSSEYSTPES SMPAIKSKRK HSKRVTDDAV LTTHAAGHHS SNESSSAAPS  420
TASEPSESAA ATPTQSGGVS RRGRKQSLTD DPSKTFVCTL CSRRFRRQEH LKRHYRSLHT  480
HDKPFECTDC GKKFSRSDNL SQHQRTHGAG TMIMGVLTQP MADGMQQPIE SVNGGDSGSM  540
IRPKSQDSFQ SHLSGPQRVS PDAGQLGAVL FDITAQAAGS SSSSAGYSDS DSSQGSDQKT  600
PKKRKREE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	599	605	KTPKKRK