PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023890094.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 281aa    MW: 32740.1 Da    PI: 7.8922
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023890094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.79.5e-2429117189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYneY++++ F +rk++ +k k++g +t+r+f C keg r ++k++ ++++++raetr+gC+a+l++ +++ +++++v+++  eHnH l
  XP_023890094.1  29 DFYNEYSRKASFIIRKEYVNKCKKTGVVTSRRFLCVKEGVRGKDKRD-QNTKNPRAETRCGCEARLVIVLNRdSKNYVVNEFIAEHNHYL 117
                     6*******************************************999.99*******************999899*************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGIHVPSNVP MESAPFKGME FEANEIAYDF YNEYSRKASF IIRKEYVNKC KKTGVVTSRR  60
FLCVKEGVRG KDKRDQNTKN PRAETRCGCE ARLVIVLNRD SKNYVVNEFI AEHNHYLHLP  120
STVHMMPSQR KVVATHAIEI DLAHESGLRL KQSYELLSKQ VGRYDDFDFT KQDHKNYLCT  180
KRERYIEHGE AASFGRYFNH QLKENPSYYF ATQLDCEELI TNIFWADARM IIDYSHFSDV  240
IMFDTMYSTN RDARPLGVFL GLNPHRETVV FGGALLYNET N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-53FAR1 family protein