PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023890065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 187aa MW: 21103.3 Da PI: 4.731 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.4e-16 | 2 | 43 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ XP_023890065.1 2 TPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 43 9*****************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 187 aa Download sequence |
MTPQEERLVL ELHSKWGNRW SRIARKLPGR TDNEIKNYWR THMRKKAQEE KQAMSPSPSS 60 SNCSSSSPSN PIVESLPFTE TGEKSFHDAG GPDIKASAEK QVEEEQGGEK GYSMDDIWKD 120 IKNTLIPGND GYTEEGSSFP CPTLDFPTWD QYHSESPWTM AEESKMFLPA CDHLFPCSDY 180 GTAYLSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G46130.2 | 2e-39 | MYB_related family protein |