PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023890007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 28148 Da PI: 6.7906 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43 | 8.1e-14 | 71 | 117 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+ErrRR+riNs +++Lr l+P a kK++Ka+ L +++ ++k+L XP_023890007.1 71 KSHCEAERRRRARINSHLDTLRGLVPGA-----KKMDKASLLAEVISHMKEL 117 58*************************9.....9****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEPFAWSSNT IAFGSDGLLN DELLVNSSMV RNGSDSSSSL VLDSERSQLV EARMKLERKG 60 GTAERTIAAL KSHCEAERRR RARINSHLDT LRGLVPGAKK MDKASLLAEV ISHMKELKRS 120 AEEASDGFVI PMDFDEVIVE REDGFDGDPY SIRASLCCDF KPGLLSDLKQ ALSGLHLIII 180 RAEIATLGGR MKNVLVMTNH KEGEVNHSEV RQALRSVLDK FSGSQEFLLG TTFSNKRQRI 240 SIFNCSSSSS LGDVW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25710.1 | 5e-34 | bHLH family protein |