PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023889897.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 321aa    MW: 35204.9 Da    PI: 8.7694
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023889897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-18107157256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  XP_023889897.1 107 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYETAEAAAYAYDRAAYKLRGE 157
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDTNQDQNLP LTNTDGADIR SSLSQLILTG GTSTLDSIFS HCSPSNAITN PVFEPLGSSV  60
YLHQRDLLQK LWQENRPSSL LNHTSLNIPL QSSVCTSSYK SPCKKKLYRG VRQRHWGKWV  120
AEIRLPQNRM RVWLGTYETA EAAAYAYDRA AYKLRGEYAR LNFPNLKDPS KLGFGDCARL  180
NALKSSVDAK IQAICQKVKR GKAKKNAKKS TGGGEGSSTS SKIEKTMKVD SSSSSSSLSV  240
PLSPLVFGDS WGSELLSPAV SEDGFWKCEN SPSSVSTECP MAMALAEESD LVGCSLAKMP  300
SFDPELIWEV LADQRTMCFG R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-55ERF family protein