PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023889688.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 471aa    MW: 51676.9 Da    PI: 4.5839
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023889688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.19.9e-09159197444
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      WT+ E +ll++ v ++G + W+++a+ ++ +++  +c+ ++
   XP_023889688.1 159 WTEAETLLLLESVMKHGDD-WELVAQNLQ-NKSKLDCIAKL 197
                      *****************88.*********.*******9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MFLEKWGLIN FSANLGNSSN VSSSSNSLVV VEDEEDKARV KVEGTIPNAV RVGASPNSPK  60
PISASPIVGD SSGDAVESGF KLPPLASYLD VFGDLVKQKG LVCGNCGGNC DSGHYKYTKG  120
EFIICINCFK NQNYGENRSM DEFKQIEHVE NSSNQGAMWT EAETLLLLES VMKHGDDWEL  180
VAQNLQNKSK LDCIAKLIEL PFGELMLGSS HRYGNFGGLN GNKNGANQIQ LLSSELHESL  240
KTEGQSHEQI NEKEQNGDAV DEGPPSKKQR ITSLSDAGGS LMKQVALIST MVGPEITAAA  300
AGAAVTALCD ENSLPRETFD VDEDYISNGI CSPTTSFEQE RFLQDEDSKL RERSTQSETQ  360
DTSLKRDDIP LTVRIRASIG TALGAAAARS KLLADQEDRE IENLVAIIIE TQMKKLHQKI  420
KHFDDLELIM EKEYTEIEDL KDSLLAERIE VLQRAVNAGI CRWRDHFAVK S