PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023889584.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family SBP
Protein Properties Length: 267aa    MW: 30441.4 Da    PI: 9.7403
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023889584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.85.8e-42142219178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cq+e+C+adls+ak yhrrhkvCe+h+ka+vvlv g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk++a
  XP_023889584.1 142 CCQAEKCTADLSDAKPYHRRHKVCEQHAKAQVVLVGGIRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKNSA 219
                     6**************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MQQLHHQYHP VVQIPSLPHT LSFVTFSCSN YNSSLIQSLQ PSHPYPTELI IHCFATHFFS  60
KFFSHFFVKS KTIIMSLGKA DGNYQRMEKQ QKAVKKEAMM ESSDEEFESL EEEKRQKGVV  120
GSVGFGNNGK KGGSTAGNGM RCCQAEKCTA DLSDAKPYHR RHKVCEQHAK AQVVLVGGIR  180
QRFCQQCSRF HELSEFDETK RSCRRRLAGH NERRRKNSAE SHAEGSSRKG IGGNHQLKDL  240
VCGQVDDRGR IKITIHENST YKHFQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.16e-48SBP family protein