PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023889572.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 1727aa MW: 188212 Da PI: 5.6915

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023889572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.5	3e-08	796	837	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE ++ d + +G++ +++Ia+ + ++t +c+++++k XP_023889572.1 796 PWTSEEKAIFMDKLTTFGKD-FRKIASFLD-HKTTADCVEFYYK 837 8***************99.*****.*********98 PP
2	Myb_DNA-binding	30.4	9.3e-10	1012	1052	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE ++++av +G++ + I+r++ +R++ qck ++ XP_023889572.1 1012 DWTDEEKSIFIQAVSSYGKD-FVMISRCVR-TRSRDQCKVFFS 1052 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1727 aa Download sequence
MPPEPLSSDR KERKHDRSSE SLGSAARWRG DSSYHGSREF YRGGSAEFRR PTGHGKQGGW 60 HMYTEESGHG YVPSRSGDKM LEDEGCRLLF SRGDGKYGRS SRENRFSQRD WKGHSWESGI 120 GSPNTPGRLV DASNNDLRSV DDMITCSSHP NSDFVNTWDR LHSKDQPDKM TGVNGLGTGQ 180 RCDRENSLGS DWKTLKWSRS GSLSSRGSGF SHSSSSKSMG GVDSNETKAD VQYKNATPIQ 240 SPSGDAAACV TSAAPFEEAT SKKKPRLGWG EGLAKYEKKK VEGPDGSVNK DGALISTSST 300 EPIHSFVSNM AEKSPRVTVF SDCASPATPS SVACSSSPGV EDKSFGKAAN IDNDISNLCV 360 SPSPVSQNHL EGFPFNLEKL DTNSISNLGS SLVELLQPDD PSSVDSCYER GTAINKLLIY 420 KGEISKALEL TESEIDLLEN ELKSLKSESE SGDPRPAVSS SLPVENNAKR CNEQDAVSSL 480 IPRPAQLHVV SFGDTVAEKM PLCNGASEEV HAALKDDDMD SPGTATSKFV EPLSLVKVVS 540 SPDKVEHGVS SGNLDAIQFQ SGDVDVKCSV DVDVKCSVPG SGWDNTGALV SNELSSHTDG 600 EEALCDLILA SNRECASRAS EVFKRLLPRD QCMTDIFQAA KFSSCQDSSL IKEKFARRKQ 660 FLRFKERVIT LKFKAFQHLW KEDMRLLSVR KHRPKSQKKS EFSLRTAHNG NQKHRSSIRS 720 RFSSPAGNLS LVPTTEIINF TSKLLSDSQV KLYRSALKMP ALILDKKEKI VSRFISSNGL 780 VEDPCAVEKE REMINPWTSE EKAIFMDKLT TFGKDFRKIA SFLDHKTTAD CVEFYYKNHK 840 SDCFEKTKKQ DCSKQAKSST NTYLLTGKKW NREMNAASLD MLGAASMMAA CADDHTRNRQ 900 SNAGRVFLGG YSESKTLWGD DGISERSGSL DIVANERETV AADVLAGICG SLSSEAMSSC 960 ITSSVDPGES FREWKCQKVD SLIKRPLTPD VTQDVDDETC SDESCGEMDP SDWTDEEKSI 1020 FIQAVSSYGK DFVMISRCVR TRSRDQCKVF FSKARKCLGL DLMHPGPRNV GAPVSDDANG 1080 GGSDTEDACV VETGETGSAT CCNKSGCGLE EDLPLSNVNM NHDSDPAKIV NLQSDLNRLQ 1140 ENNGMEYMGQ EVVEAVDTLV PSAGQTEDRP ELVVHAENNI MDGVKNQPDL VHSEKTAVVL 1200 AHNEIGGDQV IEQGIPIAEP VSVEETIDSG PFSDALVENR AVASEGFENE LERQELPESS 1260 LNGQDEKCNA DTSGLQCSIQ DSITTGNASL QAADGSCSGF TLKPEYQQQI SLESEYMEKP 1320 HVSLPQQNSP TTATSVSQDS AAISCDTRLS STLDFHGNRD KHSLKSVHQH LPGHALFDHV 1380 ESSQILRGYP LQISKKKEMN GDVSCRNLSE IQNLSQSERS ISTRCMTQDC FLQKCSSSKP 1440 LSSVAELPLL SQKREQTSDH SRTRSRSLSD ADKPCRNGDV KLFGQILSKT ASTQKSNSST 1500 RENEEKGVNN PKSSSSLSNL KISGSPNVDG SSALLKIDGN NYMSYGFWDG NKIQAGFSSF 1560 TDSAFFLAKY PTAFASPPPP LPSVVKSNER NVNGLSPVFP SREVSSSNGV REISSSNGVA 1620 DYQVYRSREG AKVQPFTVDM KRQDIFSEMQ RRNGFEAVSS LQPQGRGVVG MNVVGRGVLV 1680 GGPCTSVSDP VKAIKMHFAN SDQYGGGQSG SIIREEESWR GKGDIGR

Sequence ? help Back to Top

Protein Sequence Length: 1727 aa Download sequence

MPPEPLSSDR KERKHDRSSE SLGSAARWRG DSSYHGSREF YRGGSAEFRR PTGHGKQGGW  60
HMYTEESGHG YVPSRSGDKM LEDEGCRLLF SRGDGKYGRS SRENRFSQRD WKGHSWESGI  120
GSPNTPGRLV DASNNDLRSV DDMITCSSHP NSDFVNTWDR LHSKDQPDKM TGVNGLGTGQ  180
RCDRENSLGS DWKTLKWSRS GSLSSRGSGF SHSSSSKSMG GVDSNETKAD VQYKNATPIQ  240
SPSGDAAACV TSAAPFEEAT SKKKPRLGWG EGLAKYEKKK VEGPDGSVNK DGALISTSST  300
EPIHSFVSNM AEKSPRVTVF SDCASPATPS SVACSSSPGV EDKSFGKAAN IDNDISNLCV  360
SPSPVSQNHL EGFPFNLEKL DTNSISNLGS SLVELLQPDD PSSVDSCYER GTAINKLLIY  420
KGEISKALEL TESEIDLLEN ELKSLKSESE SGDPRPAVSS SLPVENNAKR CNEQDAVSSL  480
IPRPAQLHVV SFGDTVAEKM PLCNGASEEV HAALKDDDMD SPGTATSKFV EPLSLVKVVS  540
SPDKVEHGVS SGNLDAIQFQ SGDVDVKCSV DVDVKCSVPG SGWDNTGALV SNELSSHTDG  600
EEALCDLILA SNRECASRAS EVFKRLLPRD QCMTDIFQAA KFSSCQDSSL IKEKFARRKQ  660
FLRFKERVIT LKFKAFQHLW KEDMRLLSVR KHRPKSQKKS EFSLRTAHNG NQKHRSSIRS  720
RFSSPAGNLS LVPTTEIINF TSKLLSDSQV KLYRSALKMP ALILDKKEKI VSRFISSNGL  780
VEDPCAVEKE REMINPWTSE EKAIFMDKLT TFGKDFRKIA SFLDHKTTAD CVEFYYKNHK  840
SDCFEKTKKQ DCSKQAKSST NTYLLTGKKW NREMNAASLD MLGAASMMAA CADDHTRNRQ  900
SNAGRVFLGG YSESKTLWGD DGISERSGSL DIVANERETV AADVLAGICG SLSSEAMSSC  960
ITSSVDPGES FREWKCQKVD SLIKRPLTPD VTQDVDDETC SDESCGEMDP SDWTDEEKSI  1020
FIQAVSSYGK DFVMISRCVR TRSRDQCKVF FSKARKCLGL DLMHPGPRNV GAPVSDDANG  1080
GGSDTEDACV VETGETGSAT CCNKSGCGLE EDLPLSNVNM NHDSDPAKIV NLQSDLNRLQ  1140
ENNGMEYMGQ EVVEAVDTLV PSAGQTEDRP ELVVHAENNI MDGVKNQPDL VHSEKTAVVL  1200
AHNEIGGDQV IEQGIPIAEP VSVEETIDSG PFSDALVENR AVASEGFENE LERQELPESS  1260
LNGQDEKCNA DTSGLQCSIQ DSITTGNASL QAADGSCSGF TLKPEYQQQI SLESEYMEKP  1320
HVSLPQQNSP TTATSVSQDS AAISCDTRLS STLDFHGNRD KHSLKSVHQH LPGHALFDHV  1380
ESSQILRGYP LQISKKKEMN GDVSCRNLSE IQNLSQSERS ISTRCMTQDC FLQKCSSSKP  1440
LSSVAELPLL SQKREQTSDH SRTRSRSLSD ADKPCRNGDV KLFGQILSKT ASTQKSNSST  1500
RENEEKGVNN PKSSSSLSNL KISGSPNVDG SSALLKIDGN NYMSYGFWDG NKIQAGFSSF  1560
TDSAFFLAKY PTAFASPPPP LPSVVKSNER NVNGLSPVFP SREVSSSNGV REISSSNGVA  1620
DYQVYRSREG AKVQPFTVDM KRQDIFSEMQ RRNGFEAVSS LQPQGRGVVG MNVVGRGVLV  1680
GGPCTSVSDP VKAIKMHFAN SDQYGGGQSG SIIREEESWR GKGDIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-144	MYB family protein