PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023889571.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 1727aa MW: 188212 Da PI: 5.6915 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3e-08 | 796 | 837 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE ++ d + +G++ +++Ia+ + ++t +c+++++k XP_023889571.1 796 PWTSEEKAIFMDKLTTFGKD-FRKIASFLD-HKTTADCVEFYYK 837 8*****************99.*********.***********98 PP | |||||||
2 | Myb_DNA-binding | 30.4 | 9.3e-10 | 1012 | 1052 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE ++++av +G++ + I+r++ +R++ qck ++ XP_023889571.1 1012 DWTDEEKSIFIQAVSSYGKD-FVMISRCVR-TRSRDQCKVFFS 1052 6*****************99.*********.********8776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1727 aa Download sequence |
MPPEPLSSDR KERKHDRSSE SLGSAARWRG DSSYHGSREF YRGGSAEFRR PTGHGKQGGW 60 HMYTEESGHG YVPSRSGDKM LEDEGCRLLF SRGDGKYGRS SRENRFSQRD WKGHSWESGI 120 GSPNTPGRLV DASNNDLRSV DDMITCSSHP NSDFVNTWDR LHSKDQPDKM TGVNGLGTGQ 180 RCDRENSLGS DWKTLKWSRS GSLSSRGSGF SHSSSSKSMG GVDSNETKAD VQYKNATPIQ 240 SPSGDAAACV TSAAPFEEAT SKKKPRLGWG EGLAKYEKKK VEGPDGSVNK DGALISTSST 300 EPIHSFVSNM AEKSPRVTVF SDCASPATPS SVACSSSPGV EDKSFGKAAN IDNDISNLCV 360 SPSPVSQNHL EGFPFNLEKL DTNSISNLGS SLVELLQPDD PSSVDSCYER GTAINKLLIY 420 KGEISKALEL TESEIDLLEN ELKSLKSESE SGDPRPAVSS SLPVENNAKR CNEQDAVSSL 480 IPRPAQLHVV SFGDTVAEKM PLCNGASEEV HAALKDDDMD SPGTATSKFV EPLSLVKVVS 540 SPDKVEHGVS SGNLDAIQFQ SGDVDVKCSV DVDVKCSVPG SGWDNTGALV SNELSSHTDG 600 EEALCDLILA SNRECASRAS EVFKRLLPRD QCMTDIFQAA KFSSCQDSSL IKEKFARRKQ 660 FLRFKERVIT LKFKAFQHLW KEDMRLLSVR KHRPKSQKKS EFSLRTAHNG NQKHRSSIRS 720 RFSSPAGNLS LVPTTEIINF TSKLLSDSQV KLYRSALKMP ALILDKKEKI VSRFISSNGL 780 VEDPCAVEKE REMINPWTSE EKAIFMDKLT TFGKDFRKIA SFLDHKTTAD CVEFYYKNHK 840 SDCFEKTKKQ DCSKQAKSST NTYLLTGKKW NREMNAASLD MLGAASMMAA CADDHTRNRQ 900 SNAGRVFLGG YSESKTLWGD DGISERSGSL DIVANERETV AADVLAGICG SLSSEAMSSC 960 ITSSVDPGES FREWKCQKVD SLIKRPLTPD VTQDVDDETC SDESCGEMDP SDWTDEEKSI 1020 FIQAVSSYGK DFVMISRCVR TRSRDQCKVF FSKARKCLGL DLMHPGPRNV GAPVSDDANG 1080 GGSDTEDACV VETGETGSAT CCNKSGCGLE EDLPLSNVNM NHDSDPAKIV NLQSDLNRLQ 1140 ENNGMEYMGQ EVVEAVDTLV PSAGQTEDRP ELVVHAENNI MDGVKNQPDL VHSEKTAVVL 1200 AHNEIGGDQV IEQGIPIAEP VSVEETIDSG PFSDALVENR AVASEGFENE LERQELPESS 1260 LNGQDEKCNA DTSGLQCSIQ DSITTGNASL QAADGSCSGF TLKPEYQQQI SLESEYMEKP 1320 HVSLPQQNSP TTATSVSQDS AAISCDTRLS STLDFHGNRD KHSLKSVHQH LPGHALFDHV 1380 ESSQILRGYP LQISKKKEMN GDVSCRNLSE IQNLSQSERS ISTRCMTQDC FLQKCSSSKP 1440 LSSVAELPLL SQKREQTSDH SRTRSRSLSD ADKPCRNGDV KLFGQILSKT ASTQKSNSST 1500 RENEEKGVNN PKSSSSLSNL KISGSPNVDG SSALLKIDGN NYMSYGFWDG NKIQAGFSSF 1560 TDSAFFLAKY PTAFASPPPP LPSVVKSNER NVNGLSPVFP SREVSSSNGV REISSSNGVA 1620 DYQVYRSREG AKVQPFTVDM KRQDIFSEMQ RRNGFEAVSS LQPQGRGVVG MNVVGRGVLV 1680 GGPCTSVSDP VKAIKMHFAN SDQYGGGQSG SIIREEESWR GKGDIGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52250.1 | 1e-144 | MYB family protein |