PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023889531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 256aa MW: 29479 Da PI: 6.2507 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ ++ g+ R++k+c++rw++yl XP_023889531.1 14 KGTWTPEEDRKLIAYVTKYGCWNWRQLPKFAGLSRCGKSCRLRWLNYL 61 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 56.5 | 6.5e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE+e ++++++ lG++ W+tIa+ ++ gRt++++k++w++ XP_023889531.1 67 RGNYSKEEEETIIKLHESLGNR-WSTIASQLP-GRTDNEIKNHWHTN 111 899*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MVRTPCCDKS GMKKGTWTPE EDRKLIAYVT KYGCWNWRQL PKFAGLSRCG KSCRLRWLNY 60 LRPNIKRGNY SKEEEETIIK LHESLGNRWS TIASQLPGRT DNEIKNHWHT NLKKRLKQNS 120 IAQEENSSSN NVFPREKSQK RLKGANNSHL HQETVEIIDS SMLSPQQSSS EFSSITTDTA 180 VAMSTNMVVD DNVTSLEAYA ETNDNFWTQP FLADNSYILS DFQAPLLDTE VLSPLFDEFL 240 CPYGLYEEHE GFDLCF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | LKKRLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 7e-63 | MYB family protein |