PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023889168.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 2095aa MW: 229922 Da PI: 10.255

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023889168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.9	1.5e-10	1042	1084	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T+ E ++++ a+k+ +++ W Ia+ ++ gRt k+c++++++ XP_023889168.1 1042 TFTENERQIFIAAFKETPKK-WGEIASLLP-GRTYKDCIHHYYTN 1084 79****************.*****.*********986 PP
2	Myb_DNA-binding	24.8	5.1e-08	1297	1336	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 W+ E+ ++++++ +G++ +++Ia++mg ++t ++k+++ XP_023889168.1 1297 YWSVPEQTDFAKYIAHFGTD-FASIAAHMG-TKTQTMIKNHY 1336 59999*************.*****.********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 2095 aa Download sequence
MSSRYPPSDY RVPRDRSRSP SRFDRRASTA NAFENRPQPP PRISSDAPRG PRTQFDAPRP 60 TPGAGPSPTP SARPTFSSLR DAPPLSSGDR GRPFRERDDY RRDRPPSPRE RSPVRPFKAS 120 RDYPPRDADV VRPRRGSRDG PLSAGATYPD NPPFASTSFS RGGFTGRGRG RVDFEPSRGR 180 GARRNLDDRD LFRRERSPPP RWGARDLSRD GREPERRDER RFDRRDEDRR SEWAERERDS 240 VDRGRREQPP LRPEPRQLNG SPHSATGSHG GSQAPPIDPG RLALIEGSGA DVAARKQSVS 300 QNAAAAPPRR EQPETPSYLN GRADATANRY NQRGSSPPTQ APPVPAFTLS FAPTGPAVAT 360 TSGTSATKPS QPKPPAPSDD IPVQDHTKVE RRVEPPVDAP IAPKAQARAP LAPKAQLAEP 420 PPTAPRAPRA LELETSSGPH GRLQGVRSLE SLAGSRAPPS GPSFPRASVP PRSSSIAQTT 480 PSSASSLSTL TQPVSPMVQQ TREFAAPTGP RASRISPALA SVSPRPAFTS PRSETTGVQG 540 YAGGPRAQTP PLPSGPRKRS ISVSPKVSTS TVPTAPKADR VPPTAPRAGP IAPGRTTDRP 600 NGPPLWGVPS APRNLQWNQW KRPPPHAESK IVPAKRDSTG EERDRQAEIG SDDPTRSATG 660 ASPKVQHGSR QARTQDEDRM QIDNETHPPA HSAKQSFFGQ PMETAEDDEA SDVAGEEEEE 720 EIMSSSEDEG LDVEDEALFN AKFEKRKREL EAKLVDLSAR EYRATTPLEC IARLARISFS 780 DLQRVNEHQD MDVDDTSAKG HRLRPPPTQN SDSDGNADAI TPKHDEDARV QIRHGDDSPE 840 HIRYVRRPSP EIINLPYLTK ASQPLFKSEP LLESSRDEES TQVAVLDALR DGMEAIADAQ 900 ADCERDFLER LRTWRAQCAR LDREQEEHEK VERQKSMEPP PEIDAALTST SNVGPEGRRL 960 HKFSSEYIIE QVLKQSEETA RMEQEKLDRK AKKVQADMEK EASLPDLLSE EEVRSSIYID 1020 SNRYRDPESL PMVFSYLPPD DTFTENERQI FIAAFKETPK KWGEIASLLP GRTYKDCIHH 1080 YYTNKWDSRF KDRTKGKSRG GPGRGRGRGG KSALRGRGAA AMADLNRNEP VTAPNVSDSG 1140 RPKRAAAPTT FGERETDLKT APVGSSPVKK VNAVTKLDGA GEPEKKKRKG EKPGRKPKAQ 1200 QPLAALAAAP PITSPPKPFL PAMHSKEETV RAQNLADANL LAGLHTGHHH SMIVPADGQI 1260 SYAVHDTFAQ PPLPIDEPTR PKPLGPAVMS KSNASSYWSV PEQTDFAKYI AHFGTDFASI 1320 AAHMGTKTQT MIKNHYIRQV ESGNKAELEA SAKDADQRRK NGEDMGAPPT PTPIVKRKYD 1380 NPPTNAPRPL APHKNANAMD VDEASPQSRI IPSKHTSPQQ FVQQPRFTTT AQSTPVTAPS 1440 PLPAAAVPQH TPHIQPVPLA RPMQHSLSSQ MSFLADAMPE PRSNLQQSSQ SLRMISDAGN 1500 DPSVPTPLPP RSQPSLEMIR DLKAEQDRAF RVQQEQSQQD RIGLHRQIPM HQESMLASPA 1560 TQPRLAPTLE RQSSKEESAA TAPSRSVFAA TGLTGLSRPQ SSQPIFGLGG MGLGSPLSNR 1620 SPFRQAQIKR EEPRPSSVPA VPLPAIAPPA PAPEPPKRSN LMSILNSDPE PVAPPPKRES 1680 LSVAPLRTSS PAPRGSAYAQ ASTPSTLLDA SSRRDMLVQP PMAQSPFAPR PSYQHPGEKV 1740 GQPLSQPTTL KHELSSGGLP VSQPPKPDWA SHVHQRSSQP SQPTRSTLDS GDLRSSIFSH 1800 RPSALSSLNQ PVRGNPSPPP NAMLGHSRTS SLTAPTSQAP RDPQRPGLAM QQPPHQSHSS 1860 VPPLQPGSYG NQSSPSAFHQ HPQDLRNHAP HSHSASLGAG FGLAGAHHRG VSRDDHMRHE 1920 QAFAQREREE QEWRRRQQED AERRESQYRH DQERQQQQQQ QQQQQQTQQQ SQPVFGRSLP 1980 PAMQPAFEAA APPFGQGRPA YGLREASLRE VQSIVAEQSY MEEASRRRHE ALMLDRERDA 2040 AADYRRRQHD EPGFRRTPLG AGNGYAGPPP LPPSQQQQQQ QQQQQQQPPP PPSRR

Sequence ? help Back to Top

Protein Sequence Length: 2095 aa Download sequence

MSSRYPPSDY RVPRDRSRSP SRFDRRASTA NAFENRPQPP PRISSDAPRG PRTQFDAPRP  60
TPGAGPSPTP SARPTFSSLR DAPPLSSGDR GRPFRERDDY RRDRPPSPRE RSPVRPFKAS  120
RDYPPRDADV VRPRRGSRDG PLSAGATYPD NPPFASTSFS RGGFTGRGRG RVDFEPSRGR  180
GARRNLDDRD LFRRERSPPP RWGARDLSRD GREPERRDER RFDRRDEDRR SEWAERERDS  240
VDRGRREQPP LRPEPRQLNG SPHSATGSHG GSQAPPIDPG RLALIEGSGA DVAARKQSVS  300
QNAAAAPPRR EQPETPSYLN GRADATANRY NQRGSSPPTQ APPVPAFTLS FAPTGPAVAT  360
TSGTSATKPS QPKPPAPSDD IPVQDHTKVE RRVEPPVDAP IAPKAQARAP LAPKAQLAEP  420
PPTAPRAPRA LELETSSGPH GRLQGVRSLE SLAGSRAPPS GPSFPRASVP PRSSSIAQTT  480
PSSASSLSTL TQPVSPMVQQ TREFAAPTGP RASRISPALA SVSPRPAFTS PRSETTGVQG  540
YAGGPRAQTP PLPSGPRKRS ISVSPKVSTS TVPTAPKADR VPPTAPRAGP IAPGRTTDRP  600
NGPPLWGVPS APRNLQWNQW KRPPPHAESK IVPAKRDSTG EERDRQAEIG SDDPTRSATG  660
ASPKVQHGSR QARTQDEDRM QIDNETHPPA HSAKQSFFGQ PMETAEDDEA SDVAGEEEEE  720
EIMSSSEDEG LDVEDEALFN AKFEKRKREL EAKLVDLSAR EYRATTPLEC IARLARISFS  780
DLQRVNEHQD MDVDDTSAKG HRLRPPPTQN SDSDGNADAI TPKHDEDARV QIRHGDDSPE  840
HIRYVRRPSP EIINLPYLTK ASQPLFKSEP LLESSRDEES TQVAVLDALR DGMEAIADAQ  900
ADCERDFLER LRTWRAQCAR LDREQEEHEK VERQKSMEPP PEIDAALTST SNVGPEGRRL  960
HKFSSEYIIE QVLKQSEETA RMEQEKLDRK AKKVQADMEK EASLPDLLSE EEVRSSIYID  1020
SNRYRDPESL PMVFSYLPPD DTFTENERQI FIAAFKETPK KWGEIASLLP GRTYKDCIHH  1080
YYTNKWDSRF KDRTKGKSRG GPGRGRGRGG KSALRGRGAA AMADLNRNEP VTAPNVSDSG  1140
RPKRAAAPTT FGERETDLKT APVGSSPVKK VNAVTKLDGA GEPEKKKRKG EKPGRKPKAQ  1200
QPLAALAAAP PITSPPKPFL PAMHSKEETV RAQNLADANL LAGLHTGHHH SMIVPADGQI  1260
SYAVHDTFAQ PPLPIDEPTR PKPLGPAVMS KSNASSYWSV PEQTDFAKYI AHFGTDFASI  1320
AAHMGTKTQT MIKNHYIRQV ESGNKAELEA SAKDADQRRK NGEDMGAPPT PTPIVKRKYD  1380
NPPTNAPRPL APHKNANAMD VDEASPQSRI IPSKHTSPQQ FVQQPRFTTT AQSTPVTAPS  1440
PLPAAAVPQH TPHIQPVPLA RPMQHSLSSQ MSFLADAMPE PRSNLQQSSQ SLRMISDAGN  1500
DPSVPTPLPP RSQPSLEMIR DLKAEQDRAF RVQQEQSQQD RIGLHRQIPM HQESMLASPA  1560
TQPRLAPTLE RQSSKEESAA TAPSRSVFAA TGLTGLSRPQ SSQPIFGLGG MGLGSPLSNR  1620
SPFRQAQIKR EEPRPSSVPA VPLPAIAPPA PAPEPPKRSN LMSILNSDPE PVAPPPKRES  1680
LSVAPLRTSS PAPRGSAYAQ ASTPSTLLDA SSRRDMLVQP PMAQSPFAPR PSYQHPGEKV  1740
GQPLSQPTTL KHELSSGGLP VSQPPKPDWA SHVHQRSSQP SQPTRSTLDS GDLRSSIFSH  1800
RPSALSSLNQ PVRGNPSPPP NAMLGHSRTS SLTAPTSQAP RDPQRPGLAM QQPPHQSHSS  1860
VPPLQPGSYG NQSSPSAFHQ HPQDLRNHAP HSHSASLGAG FGLAGAHHRG VSRDDHMRHE  1920
QAFAQREREE QEWRRRQQED AERRESQYRH DQERQQQQQQ QQQQQQTQQQ SQPVFGRSLP  1980
PAMQPAFEAA APPFGQGRPA YGLREASLRE VQSIVAEQSY MEEASRRRHE ALMLDRERDA  2040
AADYRRRQHD EPGFRRTPLG AGNGYAGPPP LPPSQQQQQQ QQQQQQQPPP PPSRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1099	1109	RGGPGRGRGRG
2	1169	1189	KKVNAVTKLDGAGEPEKKKRK