PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023888860.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 936aa MW: 104908 Da PI: 7.4799

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023888860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.4	2.9e-06	75	97	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ks+ r ++L rH r+H XP_023888860.1 75 YSCGRCSKSYARLDHLSRHVRMH 97 99*******************99 PP
2	zf-C2H2	20.2	1.6e-06	103	125	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F r ++LkrH H XP_023888860.1 103 YQCQVCTKAFARADLLKRHALGH 125 9******************8766 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
MSPYVSSHEP LPGKPSFDHD STSGHEESAH RRARSVSVAD GGDAATPAPN VNNLVEVKNN 60 NTTSPNGPSA SQRLYSCGRC SKSYARLDHL SRHVRMHTQE KPYQCQVCTK AFARADLLKR 120 HALGHNKDDP RAKPTVVQHS RVSQACEACA GLHLKCEEDK PCKRCTKKGI ECHFTPSFGP 180 EGEMESSPRQ RRKLSLHQQY PEGSDQQHYQ DHTPQQHQQR MHNIPPVPQM QQIQPQTPVG 240 QQSNLPMTRT PMQLPSMQGT NLQRTPMSVN DQMMLSQQNS TSDVGMIDYM RDRAMPTIPP 300 PRGQGVQLMD YQQATPWPAR ELFDFGVDTN MELNDLDLSF LDTYNNANPF DLXXXXXXXX 360 XXSTCASADT TVLPDASVWR FRPLAKDSGS AEQANLSLPT PTSLEIDRRV TCEPLSQTSR 420 DKVLAMILST CKPNSIPRAV ACFPSISLLD SLFQFSLTSP GSHAKHWIHA SSLVAGQTRP 480 EVLAAIIAAG AVLTPDTSIR KVGYAIQEAI RTAVQVQVEE DNTLMRDLQI MQASLLQLKI 540 GLWSGDSRKM ELAEGFQQVL VTMARRGGFF RRGTYERIVP YAEDTGELLE TRWRQWVKQE 600 SRKRFALHLF RHDLEASVSL LSSPLISYAE LYLPLPESEA LWHSPSAEQW KATYMRSSPP 660 RWERQPSLVD CIQDLDILTT KDIWVDQRQA SMAVLGAAWR MIWEYRQLDS SMKDYTSQWC 720 SSNLLMSARH SELTKLLQCF RVSSVEDAKV TLILELLLMH LHISIDDIHL FAGVEGSDEA 780 RRVYPALVQW TRTTTARQAL WHAGQVIRAA RTLRQGLICD FAAIACYQAS LALWCYGIIT 840 RAGEDQNMSS SQITAWLDSS NDKGVQRWIV SGEGDAAIHA WTANSPRKSW ALVGSPDEAV 900 TAVVATMRRN HNEARNPPLV DNLINIMEGL GKAVRT

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

MSPYVSSHEP LPGKPSFDHD STSGHEESAH RRARSVSVAD GGDAATPAPN VNNLVEVKNN  60
NTTSPNGPSA SQRLYSCGRC SKSYARLDHL SRHVRMHTQE KPYQCQVCTK AFARADLLKR  120
HALGHNKDDP RAKPTVVQHS RVSQACEACA GLHLKCEEDK PCKRCTKKGI ECHFTPSFGP  180
EGEMESSPRQ RRKLSLHQQY PEGSDQQHYQ DHTPQQHQQR MHNIPPVPQM QQIQPQTPVG  240
QQSNLPMTRT PMQLPSMQGT NLQRTPMSVN DQMMLSQQNS TSDVGMIDYM RDRAMPTIPP  300
PRGQGVQLMD YQQATPWPAR ELFDFGVDTN MELNDLDLSF LDTYNNANPF DLXXXXXXXX  360
XXSTCASADT TVLPDASVWR FRPLAKDSGS AEQANLSLPT PTSLEIDRRV TCEPLSQTSR  420
DKVLAMILST CKPNSIPRAV ACFPSISLLD SLFQFSLTSP GSHAKHWIHA SSLVAGQTRP  480
EVLAAIIAAG AVLTPDTSIR KVGYAIQEAI RTAVQVQVEE DNTLMRDLQI MQASLLQLKI  540
GLWSGDSRKM ELAEGFQQVL VTMARRGGFF RRGTYERIVP YAEDTGELLE TRWRQWVKQE  600
SRKRFALHLF RHDLEASVSL LSSPLISYAE LYLPLPESEA LWHSPSAEQW KATYMRSSPP  660
RWERQPSLVD CIQDLDILTT KDIWVDQRQA SMAVLGAAWR MIWEYRQLDS SMKDYTSQWC  720
SSNLLMSARH SELTKLLQCF RVSSVEDAKV TLILELLLMH LHISIDDIHL FAGVEGSDEA  780
RRVYPALVQW TRTTTARQAL WHAGQVIRAA RTLRQGLICD FAAIACYQAS LALWCYGIIT  840
RAGEDQNMSS SQITAWLDSS NDKGVQRWIV SGEGDAAIHA WTANSPRKSW ALVGSPDEAV  900
TAVVATMRRN HNEARNPPLV DNLINIMEGL GKAVRT