PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888780.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 309aa    MW: 35102.2 Da    PI: 10.4549
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888780.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.72.9e-2028113899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     + +l++grl++pkkf++++g+k   s    l+ ++g +Wev l  +k+ g+++l+kGW+eF++   Lk g  vvF+++g+s f  +v +f+ 
  XP_023888780.1  28 HKNLRNGRLTIPKKFTSKYGEK--LSSLAFLTLPNGAKWEVGL--TKHEGEVWLQKGWREFAEYYSLKLGYLVVFRYEGNSHF--HVLIFDP 113
                     77899**************966..776888888**********..**********************************9999..**99986 PP
2B346.66.3e-152263011390
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                     +   ++p +f+++  +++ + +tl++     +sW+v +++ +++++  +++GW+ F+kangL++++++vF+l++r +++
  XP_023888780.1 226 KWYSSIPVNFTQKKYIQSGQYVTLKV---GDKSWKVLFSIARGKRSGSFSSGWSTFAKANGLQVKEVCVFELIKRnNNG 301
                     445689****9888666556555554...55*******9988888989************************9874444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MTYQNRRGHA DAPCDLTEGT HFFQIILHKN LRNGRLTIPK KFTSKYGEKL SSLAFLTLPN  60
GAKWEVGLTK HEGEVWLQKG WREFAEYYSL KLGYLVVFRY EGNSHFHVLI FDPSATEVDY  120
PSKSSSGHEE GQCDEKDTDD SDTSIQILPN SGPLRPKRRD TSLLPRRKKM KTTSTSGRIR  180
SQKSKLHARI PQLTNIDKAI ALKKASGFKS KNPHVMVVMQ ESFVNKWYSS IPVNFTQKKY  240
IQSGQYVTLK VGDKSWKVLF SIARGKRSGS FSSGWSTFAK ANGLQVKEVC VFELIKRNNN  300
GVVLEVSIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-41B3 family protein