PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888538.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 410aa    MW: 43496.1 Da    PI: 9.5241
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H221.65.9e-07323345123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C  C++sF+r+++LkrH r H
  XP_023888538.1 323 FRCDQCPQSFNRNHDLKRHKRIH 345
                     89*******************99 PP
2zf-C2H224.75.9e-08351371121
                     EEETTTTEEESSHHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                     ++C++C+ksFsrk+ LkrH  
  XP_023888538.1 351 FPCGHCDKSFSRKDALKRHVL 371
                     89*****************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MGSQSLTSRR PHASNLPSFE LPPPPLSAYQ KYNNYINPQQ QSATTLTSVG NLLTPPSNSS  60
ADGIGPSSSL TNGLSQQQGV ASFTPNNGAM WPPQNLNNAN AYGFQSSANS QSFGPGRPIF  120
SPSLNSIVRS PGNGELPHSA YDMSGYSGSS MSMSGTSLPP VLSHQHMPMI GNSTSVSAPL  180
ASPVHAQDAF ARPPPTPSYY HSSQSSSTPQ QTNFPSYSTG PSPVQQSPIS AGGSLSKMSP  240
INGHGSSPSL HAQQQQYSTQ QRQYSYGAPG PVLSNVNNPN GQLALVGGMQ QGMMSGYNSG  300
HAAHLQHMYG PPQHAPPPND RPFRCDQCPQ SFNRNHDLKR HKRIHLAVKP FPCGHCDKSF  360
SRKDALKRHV LVKGCGKAQA SGDIKELDDS MSPMSKTESL DHSPIVTASA