PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023888410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 252aa MW: 28399.3 Da PI: 10.7207 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.1 | 8.4e-13 | 99 | 144 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+ E++ ++ + ++lG+g+W+ I+r + ++t+ q+ s+ qky XP_023888410.1 99 MPWTEKEHQMFLVGLEKLGKGDWRGISRNFVPTKTPTQVASHAQKY 144 69*****************************9*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MARKCSHCGN MGHNSRTCNT RKRSAKFRLF GVQLDISSSS FSPSFVMRKS FSMDCLPSSS 60 TTSSSSSSLL AMDEKFDQMC NGYVSEGLIA RNQERKKGMP WTEKEHQMFL VGLEKLGKGD 120 WRGISRNFVP TKTPTQVASH AQKYFLRHNN HNKRKRRPSL FDLGRNKFRP QLVNSCVFKP 180 SSEAASVSFE FQSKRTNSKV LDHGKVGYSE WPSSTHYSMP ISFHNNIVES LPTHAASGLT 240 TKLTLQTSKC NP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 153 | 158 | KRKRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56840.1 | 2e-48 | MYB_related family protein |