PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023888397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 220aa MW: 25757.9 Da PI: 6.5783 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 137.1 | 1.2e-42 | 91 | 216 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppGfrF+Ptd +lv++yL +kv +++l+ + i +v++y++ P+ L + + ++k+wyfF++r++ky++gk+++ra+ +gyWkatg+d++++ XP_023888397.1 91 PPGFRFSPTDFDLVMHYLIRKVLNHPLPW-NRIVDVQLYDHSPEWLAeEYKQYGQKKWYFFTPRERKYRNGKHPSRAAGDGYWKATGTDTAIKF- 183 8****************************.77**************8334445889*************************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ +vg kk Lvf++g+apkg kt+W+m+eyr+ XP_023888397.1 184 KELVVGYKKKLVFHRGKAPKGDKTNWIMNEYRI 216 8999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MSLSPESSVE FNHEQKQQTL MVSDITTQVV PDINHTTHSS PSVVDHPDEE KLEEKKLQLE 60 EADELDLHGL LNDFDGGAEK EYHSFEHVEP PPGFRFSPTD FDLVMHYLIR KVLNHPLPWN 120 RIVDVQLYDH SPEWLAEEYK QYGQKKWYFF TPRERKYRNG KHPSRAAGDG YWKATGTDTA 180 IKFKELVVGY KKKLVFHRGK APKGDKTNWI MNEYRINHPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15500.1 | 5e-45 | NAC family protein |