PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888278.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family E2F/DP
Protein Properties Length: 345aa    MW: 38412.9 Da    PI: 5.7176
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.31.1e-2792174271
         E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_023888278.1  92 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpsnsvtspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 174
                     689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MGTRSQQLSR EEEEEDPPGR GATTISGQSV STSRSVGSPS SRSEQTMATP ASDSTFLRLN  60
HLDIQGDDAG SQGAVASKKK KRGQRAVGGD KSGRGLRQFS MKVCEKVESK GRTTYNEVAD  120
ELVAEFADPS NSVTSPDQQQ YDEKNIRRRV YDALNVLMAM DIISKDKKEI QWKGLPRTSL  180
NDIEELKTER LGLRNRIEKK AAYLQELDEQ FVGLQNLIQR NEQLYSSENA PSGGVALPFI  240
LVQTRPHATV EVEISEDMQL VHFDFNSTPF ELHDDNYVLK AMKFCERPQV DDMAHNFTAD  300
GGEGSSMSNM YQTQIPLPPM SNTTIRPPTS PPLPGILKAR VKHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-159E2F/DP family protein