PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023888272.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family E2F/DP
Protein Properties Length: 269aa    MW: 30552.6 Da    PI: 5.0729
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023888272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP77.51.3e-2424981371
         E2F_TDP 13 flklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71
                    f +++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_023888272.1 24 FPRVCEKVESkGRTTYNEVADELVAEfadpsncvtspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 98
                    6679***9999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MCNLRIRNGT LSLTSIEVSQ NDIFPRVCEK VESKGRTTYN EVADELVAEF ADPSNCVTSP  60
DQQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSLNDIEEL KTERLGLRNR  120
IEKKAAYLQE LDEQFVGLQN LIQRNEQLYS SGNAPSGGVA LPFILVQTRP HATVEVEISE  180
DMQLVHFDFN STPFELHDDN YVLKAMKFCE RPQVDDMAHN FTADGGEGSS MSNMYQTQIP  240
LPPMSNTTIR PPTSPPLPGI LKARVKHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-129E2F/DP family protein