PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023888109.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 425aa MW: 48185.6 Da PI: 8.0244

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023888109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100	1.6e-31	92	145	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ XP_023888109.1 92 PRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 145 8****************************************************7 PP
2	Myb_DNA-binding	47.7	3.5e-15	93	144	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ g++ ++ks++q+y+ XP_023888109.1 93 RLRWTPDLHLSFVHAVERLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 144 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MTEGLEAYEE EKSDRSEEHA ENTSVVSSQM CSSFDLNEEA SSQDDDNIAK VGELSIEDDV 60 NGTDGNSANN DTSGEGNEKR ARVRQYVRSK MPRLRWTPDL HLSFVHAVER LGGQERATPK 120 LVLQLMNVRG LSIAHVKSHL QMYRSKKLDE AGQVLGQIYR PFHGRNSVHV MSNHTSSTHR 180 HFRMANGGIV LARHSDDYNV AHGLLPSLHS QKLPVDFKAG FPRQQQWPTN QHVITRPFYL 240 TNNDLGREKG LMSSTTFQTQ AKTTASNQIH AMDINMRIGP MRPSRFLEEK RWPPIDMINN 300 SQWKVNRTSN TWDSTSTQSL GHRTTGGKFI GETYSATRPT EWNLGNNTRV RQLLSTSDDL 360 VSNSNSFKPE FAPPFRLELN QEKMLDKERL PDLQLRLSHR VGKEDEDAHD KGKSTHEIST 420 KLSLS

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MTEGLEAYEE EKSDRSEEHA ENTSVVSSQM CSSFDLNEEA SSQDDDNIAK VGELSIEDDV  60
NGTDGNSANN DTSGEGNEKR ARVRQYVRSK MPRLRWTPDL HLSFVHAVER LGGQERATPK  120
LVLQLMNVRG LSIAHVKSHL QMYRSKKLDE AGQVLGQIYR PFHGRNSVHV MSNHTSSTHR  180
HFRMANGGIV LARHSDDYNV AHGLLPSLHS QKLPVDFKAG FPRQQQWPTN QHVITRPFYL  240
TNNDLGREKG LMSSTTFQTQ AKTTASNQIH AMDINMRIGP MRPSRFLEEK RWPPIDMINN  300
SQWKVNRTSN TWDSTSTQSL GHRTTGGKFI GETYSATRPT EWNLGNNTRV RQLLSTSDDL  360
VSNSNSFKPE FAPPFRLELN QEKMLDKERL PDLQLRLSHR VGKEDEDAHD KGKSTHEIST  420
KLSLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	9e-39	G2-like family protein