PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023888037.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | B3 | ||||||||
Protein Properties | Length: 163aa MW: 18970.4 Da PI: 5.9421 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.3 | 6.6e-19 | 30 | 114 | 9 | 99 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l+ grl++pk f++++ ++ s l+ ++ +W+v+l +k+ ++++l+kGWkeF+k L++g fvvF+++g+s f v +f++ XP_023888037.1 30 ETLRVGRLTIPKMFIRKYREN--LSSPTFLKLPNDAKWKVEL--TKCNDEVWLQKGWKEFAKCYSLEQGHFVVFRYEGNSHF--QVLIFDE 114 4456699***********766..55568889999********..**********************************9999..9999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MTYQSRRDHG NAPSDLIGKD SHFFKIILDE TLRVGRLTIP KMFIRKYREN LSSPTFLKLP 60 NDAKWKVELT KCNDEVWLQK GWKEFAKCYS LEQGHFVVFR YEGNSHFQVL IFDETATEID 120 CHSNSSHGRE DGKFDEKYIV PNMEDDESDS SVLTVLPCRG DLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 2e-26 | B3 family protein |