PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023887706.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 193aa MW: 22364.2 Da PI: 9.4088 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.7 | 3.2e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l ++++ +G ++Wkt+a++ g++R++k+c++rw++yl XP_023887706.1 15 KGAWTSEEDRKLSEYIEIHGAKRWKTVAAKSGLNRCGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.5 | 4.9e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_023887706.1 68 RGNISDDEEDLILRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MAPKNDGAAK KVMNKGAWTS EEDRKLSEYI EIHGAKRWKT VAAKSGLNRC GKSCRLRWLN 60 YLRPNIKRGN ISDDEEDLIL RLHRLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKINQK 120 EKTPEPSTTQ KTMHQKTCDF AQVDKEGVRG TGNSEINFDV NEFFDFTTEG SYGLDWVNKF 180 LELDEDSWLT EKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 3e-53 | MYB family protein |