PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023887536.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 181aa MW: 21135.8 Da PI: 8.1332 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72.3 | 1.2e-22 | 18 | 166 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykv.ePwdLpkkvka......eekewyfFskrdkkyatgkrknratksgyWkatgk 88 p Gf F+P de lv++yL++k+++ + ++++evi+e d+y + ePw++ +k++ +++e++fF++ ++ ++++kr +r++ +g Wk g+ XP_023887536.1 18 PGGFVFDPLDEVLVTHYLHPKATEISdCKCHEVIPERDLYGTeEPWQIWEKMERanncirNKEEMFFFTRLKRVSSKSKRCKRSIGKGCWKGDGN 112 77*******************88766599999********9978****74333323345356799****************************** PP NAM 89 dkevlsk....kgelvglkktLvfy..........kgrapkgektdWvmheyrl 128 + +++ +++ +g+kkt + +++ + ++ +W++he +l XP_023887536.1 113 SSNIFYCvdqnERKRIGVKKTYHYEnsnvktdkskAKDDDNNNRYRWILHEISL 166 ****98767667777*******999777766654334556667999*****886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MEAVLSSSSS SSSTLEWPGG FVFDPLDEVL VTHYLHPKAT EISDCKCHEV IPERDLYGTE 60 EPWQIWEKME RANNCIRNKE EMFFFTRLKR VSSKSKRCKR SIGKGCWKGD GNSSNIFYCV 120 DQNERKRIGV KKTYHYENSN VKTDKSKAKD DDNNNRYRWI LHEISLDESL LQHAKVLTNH 180 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 4e-09 | NAC family protein |