PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023887407.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 77aa    MW: 8875.77 Da    PI: 4.4509
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023887407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.22.4e-102668145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++++E  l+++ +++ G + W++Ia +++ gRt++++  +w 
   XP_023887407.1 26 KLEFSEDEVSLIAKMFRLVGER-WSLIAGRIP-GRTAEEIEKYWT 68
                     678*******************.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MGDLAQTTND NNEETKEENK LEQDSKLEFS EDEVSLIAKM FRLVGERWSL IAGRIPGRTA  60
EEIEKYWTTK HSASSER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.12e-18MYB_related family protein