PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023887186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24506.9 Da PI: 6.801 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.6 | 2.9e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+ nrqvt+skRr gi+KKA+E+ vLCda+v+++if+++gk+++y+s XP_023887186.1 9 KRIENTNNRQVTYSKRRSGIIKKAKEITVLCDAQVSLVIFGTNGKMHDYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 77.4 | 3.6e-26 | 71 | 169 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+k+sgk+l++ak+e+l++e++++kke++n+q e+Rhl+Ged++sL+ keL Le++Le++l++iR+ ++e+l ++++ + e+e+++ L+ XP_023887186.1 71 YHKQSGKKLWDAKHENLSNEIERIKKENDNMQVELRHLKGEDITSLNPKELILLEEALENGLSSIREMQMEYLNIATRNTEMLEEENKHLALVLH 165 899*************************************************************************************9999999 PP K-box 96 kkle 99 ++ + XP_023887186.1 166 QQEM 169 8865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGRGKIEIKR IENTNNRQVT YSKRRSGIIK KAKEITVLCD AQVSLVIFGT NGKMHDYCSP 60 STTLTDILDK YHKQSGKKLW DAKHENLSNE IERIKKENDN MQVELRHLKG EDITSLNPKE 120 LILLEEALEN GLSSIREMQM EYLNIATRNT EMLEEENKHL ALVLHQQEMA MEANRDMNDE 180 YQQRVREYNS QMPFAFRVQP IQPNLQERM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 2e-91 | MIKC_MADS family protein |