PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023887029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 344aa MW: 39019.8 Da PI: 6.9066 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180.5 | 4.2e-56 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + ++++ +i evd++k+ePwdLp ++k +e+ewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_023887029.1 16 LPPGFRFHPTDEELITHYLSPKVLDANFSA-VAIGEVDLNKCEPWDLPWRAKMGEREWYFFCVRDRKYPTGLRTNRATDAGYWKATGKDKEIFK- 108 79*************************999.67***************888999****************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgek++Wvmheyrle XP_023887029.1 109 GKTLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 142 999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MENVSTTAKE DEQIELPPGF RFHPTDEELI THYLSPKVLD ANFSAVAIGE VDLNKCEPWD 60 LPWRAKMGER EWYFFCVRDR KYPTGLRTNR ATDAGYWKAT GKDKEIFKGK TLVGMKKTLV 120 FYKGRAPKGE KSNWVMHEYR LEGKYSGHNL PKTARNEWVI CRVFNKISGG KKTHISGLTK 180 LSPYANESRP SLLPPLMDSS PYNSETRIDA GETSHVTCFS SPVENHKTKE HMVDNFNTSL 240 LAASPSSNPS HISSAPNSAY YTNMGNLQYS DTALMQDQLF RMLFENHAIN MKQNMKAEFS 300 SETGFSTDMS SMVSNHDMAR RSFEDQDDPS TSGGPVDIDC LWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-127 | NAC family protein |