PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023887002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 257aa MW: 29554.4 Da PI: 7.9182 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.9 | 1.3e-19 | 184 | 230 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++vkq+G + W+ Ia++++ gR +kqc++rw+++l XP_023887002.1 184 KGQWTVEEDRLLIQLVKQYGVRKWSYIAQMLP-GRIGKQCRERWHNHL 230 799*****************************.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MELDTKFREN LASQPILLSD NYLKSYTKDD FSFEAPSSKG FLQDFHHLDQ FQTSGSSSNP 60 IFGVQTQCLN SNFTYGCTST DFDMYECKPF MDNGGHGHVM DNFESGGYLN LPQRNPIDIM 120 GLDRSHMVFT SQDIIKPLNF VVPDEVSCIT AENGYYKKIG MNKNRALPTT KKPQKGRKKS 180 NVVKGQWTVE EDRLLIQLVK QYGVRKWSYI AQMLPGRIGK QCRERWHNHL RPDIKKDTWS 240 EEEDKVLIQA HAEIGNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 2e-61 | MYB family protein |