PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023886873.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 289aa MW: 32785.5 Da PI: 7.9205 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.6 | 2.2e-16 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++v ++G g+W++++ g+ R +k+c++rw +yl XP_023886873.1 15 KGLWSPEEDQRLRNYVLKHGHGCWSSVPINAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.6e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E+e ++ +++lG++ W+ Ia++++ gRt++++k++w++yl XP_023886873.1 68 RGMFSKQEEETILTFHHMLGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 113 788*******************.*********.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MGCKSSDKPK LKHRKGLWSP EEDQRLRNYV LKHGHGCWSS VPINAGLQRN GKSCRLRWIN 60 YLRPGLKRGM FSKQEEETIL TFHHMLGNKW SQIAQHLPGR TDNEIKNYWH SYLKKKLARA 120 EEMEAHTKTQ YTSSSSDTVD SSNSPKNPRT GIPNICNSLE HMEKSTTNAY HSPKEANCSP 180 LPKLLFAEWL SLDHVQGESF ANSAEGLIAR DAFSHNSNFQ YTPMQVFSSN EGTYSGEFHN 240 GLSHDSATTE TFNLQYKFED QISGNGFVDF ISGGDACSDF NMNNGVMYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25560.1 | 7e-67 | MYB family protein |