PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886765.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 554aa    MW: 61153.6 Da    PI: 8.8763
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.3e-08441489348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      +WT  E  +lv++v + G g+W+ I r        Rt  ++k++w+++l
   XP_023886765.1 441 AWTLVEVMKLVEGVSKCGAGRWSEIKRLAFssySYRTSVDLKDKWRNLL 489
                      7***************************999**99************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    
MEVEDFLEDD KTEMHDVADS GQTVGHISDE GASSEKTQLE STEGLLKLEN SEADAGKLNA  60
RPEEIIPSSA PILNDNDINQ SGTTVECPKP LEKTIENVSS TSAIPTSSSS KPDFSKLNGE  120
ICLDKLSIRE LHEVFKATFG RETTVKDKQW LKRRIAMGLT NSCDVSTTTF TIKDNKLVTK  180
GEEECNKNVD GSFTQDPEVG ATDVNSKGSP ASHGSQMEDH QTASGKKLRS HSLELDSGSE  240
HLHIEQGAAK RIRKPTRRYI EELSEVESKD YSQRLITSPK NAVPGQTSPK SSVRPVRNVP  300
SEGRIVVTRL DSLGGSGVQV PYVSRVRRSR PRKNVMALMK FNPSSMGMAA KLVKKALGVH  360
NSQTDDNKRD KVLKKRSSAE QIQQPFFSEV EKDRQRSVMG RFERGENLGL TQADSSGDNS  420
DDNVVTVPTA KGGMRRKHHR AWTLVEVMKL VEGVSKCGAG RWSEIKRLAF SSYSYRTSVD  480
LKDKWRNLLK ASFAQTPPDD GLNSRKPTSM PIPESILLQV RELAEMNAQV PTSISSTKPI  540
MGSRNLHETR SGYL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1327333RRSRPRK
2370376DKVLKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.11e-96MYB_related family protein