PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023886765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 554aa MW: 61153.6 Da PI: 8.8763 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.4 | 3.3e-08 | 441 | 489 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G g+W+ I r Rt ++k++w+++l XP_023886765.1 441 AWTLVEVMKLVEGVSKCGAGRWSEIKRLAFssySYRTSVDLKDKWRNLL 489 7***************************999**99************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 554 aa Download sequence |
MEVEDFLEDD KTEMHDVADS GQTVGHISDE GASSEKTQLE STEGLLKLEN SEADAGKLNA 60 RPEEIIPSSA PILNDNDINQ SGTTVECPKP LEKTIENVSS TSAIPTSSSS KPDFSKLNGE 120 ICLDKLSIRE LHEVFKATFG RETTVKDKQW LKRRIAMGLT NSCDVSTTTF TIKDNKLVTK 180 GEEECNKNVD GSFTQDPEVG ATDVNSKGSP ASHGSQMEDH QTASGKKLRS HSLELDSGSE 240 HLHIEQGAAK RIRKPTRRYI EELSEVESKD YSQRLITSPK NAVPGQTSPK SSVRPVRNVP 300 SEGRIVVTRL DSLGGSGVQV PYVSRVRRSR PRKNVMALMK FNPSSMGMAA KLVKKALGVH 360 NSQTDDNKRD KVLKKRSSAE QIQQPFFSEV EKDRQRSVMG RFERGENLGL TQADSSGDNS 420 DDNVVTVPTA KGGMRRKHHR AWTLVEVMKL VEGVSKCGAG RWSEIKRLAF SSYSYRTSVD 480 LKDKWRNLLK ASFAQTPPDD GLNSRKPTSM PIPESILLQV RELAEMNAQV PTSISSTKPI 540 MGSRNLHETR SGYL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 327 | 333 | RRSRPRK |
2 | 370 | 376 | DKVLKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.1 | 1e-96 | MYB_related family protein |