PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886706.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 80aa    MW: 9103.11 Da    PI: 9.5327
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.52.3e-111558344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WTt E +++ +a + + ++   +W ++a+ +g g++++++k ++
   XP_023886706.1 15 SWTTKENKKFEKALAVYDKDtpdRWQKVAKAVG-GKSAEEVKRHY 58
                     7********************************.**********9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MASNSLSSSR SSSSSWTTKE NKKFEKALAV YDKDTPDRWQ KVAKAVGGKS AEEVKRHYEI  60
LIEDVQHIED GRVPFPNYRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-34MYB_related family protein