PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886705.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 85aa    MW: 9590.54 Da    PI: 8.9425
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886705.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.32.8e-111558344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WTt E +++ +a + + ++   +W ++a+ +g g++++++k ++
   XP_023886705.1 15 SWTTKENKKFEKALAVYDKDtpdRWQKVAKAVG-GKSAEEVKRHY 58
                     7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MASNSLSSSR SSSSSWTTKE NKKFEKALAV YDKDTPDRWQ KVAKAVGGKS AEEVKRHYEI  60
LIEDVQHIED GRVPFPNYRS SGNND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.19e-36MYB_related family protein