PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886703.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 357aa    MW: 40265.2 Da    PI: 9.9121
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.71.4e-33141197360
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                      +rY+eClkNhAas+Ggh+vDGCgEfmp+ g+egt +alkCaAC+CHRnFHR+e+e e
  XP_023886703.1 141 VIRYRECLKNHAASMGGHVVDGCGEFMPN-GDEGTLEALKCAACECHRNFHRKETEGE 197
                     689*************************8.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MELRGQDKEI RMPLPSTLGY NPTHKDSSTK LSSPTVASTV GERRRDQTAH GNTIFNPAQT  60
LDHQHHHHPL PQQPNPNSHN NTHKPGRDPD ANPDQIPAPI ATPSGATTTA ITSASKKSPT  120
PQRQPQPQQN SSTIRAAPPK VIRYRECLKN HAASMGGHVV DGCGEFMPNG DEGTLEALKC  180
AACECHRNFH RKETEGESQY VSNSYYNYNP NTNNDRREIV LPQHHRPPPL TPLPHHLHHH  240
HHHRPHPVPI APMMMAFGTG GGVPAESSSE DLGMFRSDHH VGVKGFSQAR QSKKRFRTKF  300
SQEQKDKMME FAEKLGWKIQ KHDEQDVQNF CLEVGIKRQV FKVWMHNNKQ AMKKKQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.17e-62ZF-HD family protein