PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886651.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 329aa    MW: 36396 Da    PI: 4.9995
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.11.2e-06209251855
                     HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +  rRR ri +++  L+ellP+ a    ++    a++L  +++Y+k+Lq
  XP_023886651.1 209 MTDRRRLRISERLGALQELLPHsA---EGG---QASVLDDVIDYVKYLQ 251
                     5569******************55...544...678************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MEGRSGNDNP WDLMSISVDG KANKASPVPE DYRTQHCFLA DGKCGNQTNA LPLPQWIQTP  60
QLSHNYVEYL AESSRFLPKA TAEGLLESIP SSVGGIQAVV EGVSEIQNDI LYNKFGEAPA  120
SEPSGSLHDM DVSKAWFLRP HDDGEPLNRF TSTQYQIHAQ NAVKNENSWP PELMRENCNV  180
HQPDPGAMIT APGFLSKPRH SAPKTKAMMT DRRRLRISER LGALQELLPH SAEGGQASVL  240
DDVIDYVKYL QLQIKELGRS RLGGESSTES FIFLEGYGHY ISKQILNEPL EEMMGKLLEE  300
NPAAAAQLLE SKGLFMVPIN LVEGLQQAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.12e-23bHLH family protein