PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886649.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 330aa    MW: 36524.2 Da    PI: 4.9995
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.6e-08206252455
                     HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ + +r+RR ri +++  L+ellP+ a    ++    a++L  +++Y+k+Lq
  XP_023886649.1 206 KAMMTDRQRRLRISERLGALQELLPHsA---EGG---QASVLDDVIDYVKYLQ 252
                     566789********************55...544...678************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEGRSGNDNP WDLMSISVDG KANKASPVPE DYRTQHCFLA DGKCGNQTNA LPLPQWIQTP  60
QLSHNYVEYL AESSRFLPKA TAEGLLESIP SSVGGIQAVV EGVSEIQNDI LYNKFGEAPA  120
SEPSGSLHDM DVSKAWFLRP HDDGEPLNRF TSTQYQIHAQ NAVKNENSWP PELMRENCNV  180
HQPDPGAMIT APGFLSKPRH SAPKTKAMMT DRQRRLRISE RLGALQELLP HSAEGGQASV  240
LDDVIDYVKY LQLQIKELGR SRLGGESSTE SFIFLEGYGH YISKQILNEP LEEMMGKLLE  300
ENPAAAAQLL ESKGLFMVPI NLVEGLQQAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.12e-24bHLH family protein