PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023886542.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

E2F/DP

Protein Properties

Length: 471aa MW: 51849.4 Da PI: 4.7634

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023886542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.5	8.6e-27	145	210	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_023886542.1 145 RYDSSLGLLTKKFINLLKQAEDGNLDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIHWKG 210 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MSGGARAPNR PAPPPPTVAS QILPPPPPMK RNLAVLASTK PPFVPPDDYH RFSSVVADRE 60 AEALVVRSPL LKRKNGTDDN EVQSIDWTNS PGYTSVVNSP LKTPVSAKGG RIYNRSKGTK 120 GNRSGPQTPV ANAGSPSPLT PGSCRYDSSL GLLTKKFINL LKQAEDGNLD LNKAAETLEV 180 QKRRIYDITN VLEGIGLIEK KLKNRIHWKG LDALRPGEVE DDASALQAEV ENLTMQERTL 240 DDQIREMQER LRDLSEDENK KKWLFVTKED IKGLPCLQNE TLLAIKAPHG TTLEVPDPDE 300 AVDYPQRRYR VILRSAMGPI DVYLVSQFEE KFEEMNSVEP PASFPMVSSS GSNDNPATDE 360 VVNANSTMKE VMPQAQHSHQ MCSDLNASQE FAGGMMKIVP SDVDNDADYW LLSDAEVSIT 420 DMWKTDAGIE WSGMDMLHPD FGIPDVSTPR SQTPLSGMAE VPSTAFDSTQ R

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MSGGARAPNR PAPPPPTVAS QILPPPPPMK RNLAVLASTK PPFVPPDDYH RFSSVVADRE  60
AEALVVRSPL LKRKNGTDDN EVQSIDWTNS PGYTSVVNSP LKTPVSAKGG RIYNRSKGTK  120
GNRSGPQTPV ANAGSPSPLT PGSCRYDSSL GLLTKKFINL LKQAEDGNLD LNKAAETLEV  180
QKRRIYDITN VLEGIGLIEK KLKNRIHWKG LDALRPGEVE DDASALQAEV ENLTMQERTL  240
DDQIREMQER LRDLSEDENK KKWLFVTKED IKGLPCLQNE TLLAIKAPHG TTLEVPDPDE  300
AVDYPQRRYR VILRSAMGPI DVYLVSQFEE KFEEMNSVEP PASFPMVSSS GSNDNPATDE  360
VVNANSTMKE VMPQAQHSHQ MCSDLNASQE FAGGMMKIVP SDVDNDADYW LLSDAEVSIT  420
DMWKTDAGIE WSGMDMLHPD FGIPDVSTPR SQTPLSGMAE VPSTAFDSTQ R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-176	E2F/DP family protein