PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023886375.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 427aa MW: 48455.9 Da PI: 4.7858

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023886375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.6	2.6e-32	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....s 80 lp+G++F+P+d+e++++ L +kv + + +++ +i++v+ i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + XP_023886375.1 58 LPRGVKFDPSDHEIIWHLL-AKVGEGDlkphpfIDE--FIQTVEkddgICYAHPQNLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRKIHgddfgD 148 799**********6655.5555555466554222..3444322235******.677888899**************865555558 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tg++k+v+ +g + g+kk++v+y +r k+ekt+Wvmh+y+l XP_023886375.1 149 VRWHKTGRTKPVIF-DGVQRGCKKIMVLYmsMERGGKAEKTNWVMHQYHL 197 89********.99********6545888889*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MAGPSWLVDS NRIATKIKSA SATCHPDRVT WKSNPSRACP NCQFMIDNSD VAQEWPGLPR 60 GVKFDPSDHE IIWHLLAKVG EGDLKPHPFI DEFIQTVEKD DGICYAHPQN LPGVKQDGSV 120 SHFFHRAIKA YNTGTRKRRK IHGDDFGDVR WHKTGRTKPV IFDGVQRGCK KIMVLYMSME 180 RGGKAEKTNW VMHQYHLGTA EEEQDGEYVI SKIFYQQQQQ QVKQVEKIDQ DLPETTDPVT 240 VKAGPVTPDP PPYTERRCSK NDLGQDITVT SEVPLAQHPA NECIEKEVEP EYKMPDFDDQ 300 PKVENHTGEV MDNNDVHLEE DPKWWESESQ HLLDSQQLVE ALSLCDDIFQ SQSPNRDGNE 360 NGNGKLRLSD YAQLGPEDLK KDLEECQYLA CDPANIEHDT PTEFRLSQLD FGSQDSYIAW 420 GGGKVID

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MAGPSWLVDS NRIATKIKSA SATCHPDRVT WKSNPSRACP NCQFMIDNSD VAQEWPGLPR  60
GVKFDPSDHE IIWHLLAKVG EGDLKPHPFI DEFIQTVEKD DGICYAHPQN LPGVKQDGSV  120
SHFFHRAIKA YNTGTRKRRK IHGDDFGDVR WHKTGRTKPV IFDGVQRGCK KIMVLYMSME  180
RGGKAEKTNW VMHQYHLGTA EEEQDGEYVI SKIFYQQQQQ QVKQVEKIDQ DLPETTDPVT  240
VKAGPVTPDP PPYTERRCSK NDLGQDITVT SEVPLAQHPA NECIEKEVEP EYKMPDFDDQ  300
PKVENHTGEV MDNNDVHLEE DPKWWESESQ HLLDSQQLVE ALSLCDDIFQ SQSPNRDGNE  360
NGNGKLRLSD YAQLGPEDLK KDLEECQYLA CDPANIEHDT PTEFRLSQLD FGSQDSYIAW  420
GGGKVID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-175	NAC family protein